@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_TYRO3_HUMAN: (2014-10-13 )
MALRRSMGRPGLPPLPLPPPPRLGLLLAALASLLLPESAAAGLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTATVHLQALPAAPFNITVTKLSSSNASVAWMPGADGRALLQSCTVQVTQAPGGWEVLAVVVPVPPFTCLLRDLVPATNYSLRVRCANALGPSPYADWVPFQTKGLAPASAPQNLHAIRTDSGLILEWEEVIPEAPLEGPLGPYKLSWVQDNGTQDELTVEGTRANLTGWDPQKDLIVRVCVSNAVGCGPWSQPLVVSSHDRAGQQGPPHSRTSWVPVVLGVLTALVTAAALALILLRKRRKETRFGQAFDSVMARGEPAVHFRAARSFNRERPERIEATLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLIRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVQSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEDVYDLMYQCWSADPKQRPSFTCLRMELENILGQLSVLSASQDPLYINIERAEEPTAGGSLELPGRDQPYSGAGDGSGMGAVGGTPSDCRYILTPGGLAEQPGQAEHQPESPLNETQRLLLLQQGLLPHSSC

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0T8_A_2(4FEQ)

[Raw transfer]



0JL_A_2(4DEI)

[Raw transfer]



LUN_A_2(3QUP)

[Raw transfer]



044_A_2(3U6I)

[Raw transfer]



CKJ_A_3(3TCP)
MERTK_HUMAN
[Raw transfer]



0JK_A_2(4DEH)

[Raw transfer]



0J3_A_2(4GG5)

[Raw transfer]



03X_A_2(3U6H)

[Raw transfer]



DF6_A_2(3VW8)

[Raw transfer]



L1X_A_2(4EEV)

[Raw transfer]



0JJ_A_2(4DEG)

[Raw transfer]



0J8_A_2(4GG7)

[Raw transfer]



OLP_A_8(3BPR)
MERTK_HUMAN
[Raw transfer]



B2D_A_2(3I5N)

[Raw transfer]



AM7_A_3(2RFN)
MET_HUMAN
[Raw transfer]



ANP_A_6(2P0C)
MERTK_HUMAN
[Raw transfer]



14S_A_2(4FF8)

[Raw transfer]



M97_A_3(3RHK)
MET_HUMAN
[Raw transfer]
1 PsiBlast_PDB 92.5797%-153 - C1 -3QUP 8.8
2 PsiBlast_PDB 84.4197%-141 - C1 -4FEQ 6.5
6 PsiBlast_PDB 78.2563%-143 - C1 -3TCP 7.5 MERTK_HUMAN
5 PsiBlast_PDB 77.4963%-139 - C1 -3BPR 5.8 MERTK_HUMAN
4 PsiBlast_PDB 76.8563%-141 - C1 -2P0C 4.6 MERTK_HUMAN
20 PsiBlast_PDB 73.4841%-142 - C1 -2RFN 10.5 MET_HUMAN
10 PsiBlast_PDB 70.6441%-124 * C1 *3RHK 9.3 MET_HUMAN
8 PsiBlast_PDB 70.0441%-123 - C1 -3VW8 10.5
16 PsiBlast_PDB 69.5841%-130 - C1 -4DEH 8.5
14 PsiBlast_PDB 68.9741%-134 - C1 -3U6I 11.4
17 PsiBlast_PDB 68.9341%-127 - C1 -4DEI 9.4
15 PsiBlast_PDB 68.9241%-130 - C1 -4DEG 9.4
12 PsiBlast_PDB 68.5441%-131 - C1 -3I5N 9.6
11 PsiBlast_PDB 68.3141%-131 - C1 -4EEV 11.8
13 PsiBlast_PDB 66.2941%-131 - C1 -3U6H 11.0
18 PsiBlast_PDB 65.7741%-127 - C1 -4GG5 8.8
19 PsiBlast_PDB 65.5041%-121 - C1 -4GG7 8.8
3 PsiBlast_PDB 56.0897%-139 - C1 -4FF8 5.9