@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF08515_ACVL1_MOUSE: (2014-10-15 )
MTLGSFRRGLLMLSVAFGLTRGDLAKPSKLVNCTCESPHCKRPFCQGSWCTVVLVREQGRHPQVYRGCGSLNQELCLGRPTEFLNHHCCYRSFCNHNVSLMLEATQTPSEEPEVDAHLPLILGPVLALPVLVALGALGLWRVRRRQEKQRDLHSDLGESSLILKASEQADSMLGDFLDSDCTTGSGSGLPFLVQRTVARQVALVECVGKGRYGEVWRGSWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPQLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDLKSRNVLVKSNLQCCIADLGLAVMHSQSSDYLDIGNNPRVGTKRYMAPEVLDEHIRTDCFESYKWTDIWAFGLVLWEIARRTIINGIVEDYRPPFYDMVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKLSHNPEKPKVIH

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_7(3Q4U)
ACVR1_HUMAN
[Raw transfer]



QIG_A_2(3GXL)
TGFR1_HUMAN
[Raw transfer]



ZZG_A_2(2WOT)
TGFR1_HUMAN
[Raw transfer]



855_A_2(3HMM)
TGFR1_HUMAN
[Raw transfer]



GOL_A_6(4DYM)
ACVR1_HUMAN
[Raw transfer]



LDN_C_20(3Q4U)
ACVR1_HUMAN
[Raw transfer]



IYZ_A_4(4DYM)
ACVR1_HUMAN
[Raw transfer]



844_D_16(4BGG)
ACVR1_HUMAN
[Raw transfer]



LDN_B_13(3Q4U)
ACVR1_HUMAN
[Raw transfer]



PY1_C_3(1PY5)
TGFR1_HUMAN
[Raw transfer]



GOL_A_8(4DYM)
ACVR1_HUMAN
[Raw transfer]



844_C_14(4BGG)
ACVR1_HUMAN
[Raw transfer]



ZZF_A_3(2WOU)
TGFR1_HUMAN
[Raw transfer]



844_A_5(4BGG)
ACVR1_HUMAN
[Raw transfer]



085_A_2(3TZM)
TGFR1_HUMAN
[Raw transfer]



LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]



580_B_2(1RW8)
TGFR1_HUMAN
[Raw transfer]



507_A_4(3OOM)
ACVR1_HUMAN
[Raw transfer]



844_B_10(4BGG)
ACVR1_HUMAN
[Raw transfer]



A3F_A_17(3MTF)
ACVR1_HUMAN
[Raw transfer]



TAK_A_10(4C02)
ACVR1_HUMAN
[Raw transfer]



LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]



TAK_A_3(3H9R)
ACVR1_HUMAN
[Raw transfer]



TAK_A_3(3Q4T)
AVR2A_HUMAN
[Raw transfer]



EDO_A_14(3Q4T)
AVR2A_HUMAN
[Raw transfer]
3 PsiBlast_PDB 81.9379%-114 - C1 -4C02 7.1 ACVR1_HUMAN
2 PsiBlast_PDB 72.4179%-109 - C1 -3H9R 7.9 ACVR1_HUMAN
15 PsiBlast_PDB 68.5564%-109 - C1 -2WOU 6.2 TGFR1_HUMAN
4 PsiBlast_PDB 66.6279%-106 - C1 -3MTF 7.5 ACVR1_HUMAN
47 PsiBlast_CBE 63.9279%-110 - C1 -3Q4U 8.8 ACVR1_HUMAN
8 PsiBlast_PDB 63.5579%-109 - C1 -4DYM 6.6 ACVR1_HUMAN
16 PsiBlast_PDB 62.2964%-108 - C1 -1RW8 7.3 TGFR1_HUMAN
14 PsiBlast_PDB 62.2964%-107 - C1 -2WOT 9.2 TGFR1_HUMAN
5 PsiBlast_PDB 61.4379%-105 - C1 -3OOM 7.2 ACVR1_HUMAN
13 PsiBlast_PDB 61.1964%-108 - C1 -3TZM 7.6 TGFR1_HUMAN
6 PsiBlast_PDB 60.0579%-107 - C1 -3Q4U 8.6 ACVR1_HUMAN
18 PsiBlast_PDB 59.8863%-109 - C1 -3HMM 8.1 TGFR1_HUMAN
46 PsiBlast_CBE 59.3779%-107 - C1 -3Q4U 9.2 ACVR1_HUMAN
7 PsiBlast_PDB 58.7579%-106 - C1 -4BGG 7.9 ACVR1_HUMAN
42 PsiBlast_CBE 56.2779%-106 * C1 *4BGG 8.2 ACVR1_HUMAN
44 PsiBlast_CBE 56.1479%-106 - C1 -4BGG 8.2 ACVR1_HUMAN
43 PsiBlast_CBE 53.6879%-106 - C1 -4BGG 8.1 ACVR1_HUMAN
9 PsiBlast_PDB 53.2863%-102 - C1 -1PY5 6.1 TGFR1_HUMAN
19 PsiBlast_PDB 50.6858%-100 - C1 -3MDY 4.7 BMR1B_HUMAN
17 PsiBlast_PDB 48.4763%-106 - C1 -3GXL 8.1 TGFR1_HUMAN
20 PsiBlast_PDB 0.0041% -96 - C1 -3Q4T 4.8 AVR2A_HUMAN