@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF12549_TY3H_RAT: (2014-10-18 )
MPTPSAPSPQPKGFRRAVSEQDAKQAEAVTSPRFIGRRQSLIEDARKEREAAAAAAAAAVASSEPGNPLEAVVFEERDGNAVLNLLFSLRGTKPSSLSRAVKVFETFEAKIHHLETRPAQRPLAGSPHLEYFVRFEVPSGDLAALLSSVRRVSDDVRSAREDKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEEPEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAIDVLDSPHTIQRSLEGVQDELHTLAHALSAIS

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H4B_A_4(1MMK)
PH4H_HUMAN
[Raw transfer]



H4B_A_4(1MMT)
PH4H_HUMAN
[Raw transfer]



H4B_A_3(1KW0)
PH4H_HUMAN
[Raw transfer]



ALE_A_3(3PAH)
PH4H_HUMAN
[Raw transfer]



NLE_A_5(1MMT)
PH4H_HUMAN
[Raw transfer]



LNR_A_3(4PAH)
PH4H_HUMAN
[Raw transfer]



LDP_A_3(5PAH)
PH4H_HUMAN
[Raw transfer]



DAH_A_3(6PAH)
PH4H_HUMAN
[Raw transfer]



HBI_A_3(1DMW)
PH4H_HUMAN
[Raw transfer]



HBI_A_3(1LRM)
PH4H_HUMAN
[Raw transfer]



TRP_A_5(3E2T)
TPH1_CHICK
[Raw transfer]



H4B_A_3(1J8U)
PH4H_HUMAN
[Raw transfer]



IMD_A_4(3E2T)
TPH1_CHICK
[Raw transfer]



3QI_A_3(4ANP)
PH4H_HUMAN
[Raw transfer]



TIH_A_4(1KW0)
PH4H_HUMAN
[Raw transfer]



TIH_A_5(1MMK)
PH4H_HUMAN
[Raw transfer]



PGE_A_6(3E2T)
TPH1_CHICK
[Raw transfer]
18 PsiBlast_PDB 31.3664% -94 - C1 -6PAH 3.8 PH4H_HUMAN
19 PsiBlast_PDB 30.8964% -94 - C1 -1DMW 4.2 PH4H_HUMAN
15 PsiBlast_PDB 29.9464% -93 - C1 -3PAH 3.7 PH4H_HUMAN
17 PsiBlast_PDB 29.5764% -93 - C1 -5PAH 3.8 PH4H_HUMAN
9 PsiBlast_PDB 27.1563% -93 - C1 -1LRM 4.3 PH4H_HUMAN
8 PsiBlast_PDB 26.6863% -92 - C1 -1J8U 4.5 PH4H_HUMAN
16 PsiBlast_PDB 24.7064% -90 * C1 *4PAH 3.7 PH4H_HUMAN
6 PsiBlast_PDB 20.9963% -90 - C1 -4ANP 5.9 PH4H_HUMAN
13 PsiBlast_PDB 17.3763% -92 - C1 -3E2T 4.7 TPH1_CHICK
11 PsiBlast_PDB 11.5263% -90 - C1 -1MMK 5.0 PH4H_HUMAN
12 PsiBlast_PDB 7.2063% -90 - C1 -1MMT 4.8 PH4H_HUMAN
10 PsiBlast_PDB 7.0663% -89 - C1 -1KW0 4.8 PH4H_HUMAN