@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA1_HUMAN: (2015-10-07 )
MERRWPLGLGLVLLLCAPLPPGARAKEVTLMDTSKAQGELGWLLDPPKDGWSEQQQILNGTPLYMYQDCPMQGRRDTDHWLRSNWIYRGEEASRVHVELQFTVRDCKSFPGGAGPLGCKETFNLLYMESDQDVGIQLRRPLFQKVTTVAADQSFTIRDLVSGSVKLNVERCSLGRLTRRGLYLAFHNPGACVALVSVRVFYQRCPETLNGLAQFPDTLPGPAGLVEVAGTCLPHARASPRPSGAPRMHCSPDGEWLVPVGRCHCEPGYEEGGSGEACVACPSGSYRMDMDTPHCLTCPQQSTAESEGATICTCESGHYRAPGEGPQVACTGPPSAPRNLSFSASGTQLSLRWEPPADTGGRQDVRYSVRCSQCQGTAQDGGPCQPCGVGVHFSPGARGLTTPAVHVNGLEPYANYTFNVEAQNGVSGLGSSGHASTSVSISMGHAESLSGLSLRLVKKEPRQLELTWAGSRPRSPGANLTYELHVLNQDEERYQMVLEPRVLLTELQPDTTYIVRVRMLTPLGPGPFSPDHEFRTSPPVSRGLTGGEIVAVIFGLLLGAALLLGILVFRSRRAQRQRQQRQRDRATDVDREDKLWLKPYVDLQAYEDPAQGALDFTRELDPAWLMVDTVIGEGEFGEVYRGTLRLPSQDCKTVAIKTLKDTSPGGQWWNFLREATIMGQFSHPHILHLEGVVTKRKPIMIITEFMENGALDAFLREREDQLVPGQLVAMLQGIASGMNYLSNHNYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLSFGDKPYGEMSNQEVMKSIEDGYRLPPPVDCPAPLYELMKNCWAYDRARRPHFQKLQAHLEQLLANPHSLRTIANFDPRMTLRLPSLSGSDGIPYRTVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDLTQMGITLPGHQKRILCSIQGFKD

Atome Classification :

(77 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




KAO_B_5(4KAO)

[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




ATP_A_4(2IJM)
FAK1_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




K9Y_A_2(4K9Y)

[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ADP_B_2(1MP8)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




PXK_A_3(3PXK)
FAK1_HUMAN
[Raw transfer]




4ST_B_4(2J0K)
FAK1_CHICK
[Raw transfer]




KAO_A_3(4KAO)
FAK1_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




1BQ_A_2(4I4E)

[Raw transfer]




10N_A_3(4GU6)
FAK1_HUMAN
[Raw transfer]




ADP_B_3(2IJM)

[Raw transfer]




7PY_C_3(2ETM)
FAK1_HUMAN
[Raw transfer]




10N_B_4(4GU6)

[Raw transfer]




YAM_A_2(3BZ3)

[Raw transfer]




4GU_A_3(4GU9)
FAK1_HUMAN
[Raw transfer]




4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]




BI9_B_9(4D4S)

[Raw transfer]




4ST_A_3(2J0K)
FAK1_CHICK
[Raw transfer]




5RI_A_2(4C7T)

[Raw transfer]




4GU_B_4(4GU9)

[Raw transfer]




PXK_B_5(3PXK)

[Raw transfer]




KGW_A_2(4BRX)
FAK1_CHICK
[Raw transfer]




4KA_A_3(4KAB)
FAK1_HUMAN
[Raw transfer]




4ST_B_3(2J0M)
?
[Raw transfer]




BI9_B_6(4D58)
?
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




7PY_D_4(2ETM)

[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




30G_A_2(4Q9S)

[Raw transfer]




BII_A_2(2JKM)

[Raw transfer]




4KA_B_4(4KAB)

[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




VG8_A_2(2JKQ)

[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




9RM_A_3(4D5H)
FAK1_CHICK
[Raw transfer]




BIJ_A_2(2JKO)

[Raw transfer]




1BR_A_3(4I4F)

[Raw transfer]




BI9_A_3(2JKK)
?
[Raw transfer]




K8A_A_3(4K8A)
FAK1_HUMAN
[Raw transfer]




K8A_B_4(4K8A)

[Raw transfer]




0PF_A_2(4EBW)

[Raw transfer]




KB8_B_10(4D4V)

[Raw transfer]




0O7_A_2(4EBV)

[Raw transfer]




IPA_A_3(4EBV)

[Raw transfer]




DMS_B_6(4D4V)

[Raw transfer]




58 PsiBlast_CBE 77.1657%-109 - C1 -2VWY 7.0
54 PsiBlast_CBE 77.0657%-112 - C1 -2X9F 6.7
59 PsiBlast_CBE 77.0557%-111 - C1 -2VWX 6.8
52 PsiBlast_CBE 76.8457%-114 - C1 -4BB4 7.0
39 PsiBlast_CBE 76.7257%-112 - C1 -1JPA 4.2
37 PsiBlast_CBE 76.5359%-109 - C1 -3DKO 8.0
44 PsiBlast_CBE 75.8161%-116 - C1 -2XYU 6.8
56 PsiBlast_CBE 75.7557%-109 - C1 -2VX0 7.5
12 PsiBlast_PDB 75.4757%-108 - C1 -2QOQ 4.4
11 PsiBlast_PDB 75.2957%-109 - C1 -2QO7 4.6
40 PsiBlast_CBE 75.2557%-108 - C1 -1JPA 4.1 EPHB2_MOUSE
42 PsiBlast_CBE 75.2360%-114 - C1 -2Y6M 2.6
55 PsiBlast_CBE 75.2157%-111 - C1 -2VX1 7.4
57 PsiBlast_CBE 74.9557%-108 - C1 -2VWZ 7.6
22 PsiBlast_CBE 74.9261%-112 - C1 -1MQB 4.2
41 PsiBlast_CBE 74.9060%-115 - C1 -2Y6O 6.5
7 PsiBlast_PDB 74.6357%-109 - C1 -3FXX 4.1
53 PsiBlast_CBE 74.6157%-109 - C1 -2XVD 7.2
47 PsiBlast_CBE 74.5258%-113 - C1 -4AW5 7.6
51 PsiBlast_CBE 74.0058%-110 - C1 -2HEN 4.9 EPHB2_MOUSE
45 PsiBlast_CBE 73.9257%-114 - C1 -2YN8 8.4
48 PsiBlast_CBE 73.8158%-112 - C1 -2HEN 5.6
49 PsiBlast_CBE 73.7558%-108 - C1 -2HEN 5.0 EPHB2_MOUSE
6 PsiBlast_PDB 73.5457%-109 - C1 -2QO9 4.2
26 PsiBlast_CBE 73.4557%-109 - C1 -2QOC 4.5
28 PsiBlast_CBE 73.4457%-110 - C1 -4TWN 12.0
33 PsiBlast_CBE 73.2657%-109 - C1 -4G2F 6.0
34 PsiBlast_CBE 73.2057%-112 - C1 -3DZQ 10.2
15 PsiBlast_PDB 72.7461%-109 - C1 -1MQB 4.0 EPHA2_HUMAN
50 PsiBlast_CBE 72.6858%-111 - C1 -2HEN 5.4 EPHB2_MOUSE
27 PsiBlast_CBE 72.1757%-107 - C1 -4TWO 5.7
46 PsiBlast_CBE 71.9557%-115 - C1 -2YN8 8.5 EPHB4_HUMAN
29 PsiBlast_CBE 71.6257%-110 - C1 -4P4C 6.3
60 PsiBlast_CBE 67.2554%-111 - C1 -3KUL 2.9 EPHA8_HUMAN
70 PsiBlast_CBE 63.2245%-108 - C1 -4GU9 5.0 FAK1_HUMAN
76 PsiBlast_CBE 63.0445%-107 - C1 -2J0M 7.7 ?
107 PsiBlast_CBE 62.9545%-102 - C1 -2J0K 9.0 FAK1_CHICK
87 PsiBlast_CBE 62.7945%-109 - C1 -3PXK 4.3 FAK1_HUMAN
100 PsiBlast_CBE 62.7845%-103 - C1 -4D4S 5.6
86 PsiBlast_CBE 62.7745%-104 - C1 -3PXK 5.3
78 PsiBlast_CBE 62.7545%-106 - C1 -2IJM 5.0
73 PsiBlast_CBE 62.6345%-104 - C1 -4I4E 5.4
99 PsiBlast_CBE 62.5045%-105 - C1 -4D4V - FAK1_CHICK
74 PsiBlast_CBE 62.3845%-103 - C1 -1MP8 6.0
61 PsiBlast_CBE 62.3845%-109 - C1 -2JKM 6.8
92 PsiBlast_CBE 62.2645%-106 - C1 -4D5H 4.0 FAK1_CHICK
112 PsiBlast_CBE 62.2241% -99 - C1 -3CBL 8.3
68 PsiBlast_CBE 62.2145%-102 - C1 -4K8A 3.9 FAK1_HUMAN
103 PsiBlast_CBE 62.1545%-103 - C1 -4C7T 5.9
65 PsiBlast_CBE 62.0945%-107 - C1 -4KAB 2.6 FAK1_HUMAN
105 PsiBlast_CBE 61.8845%-102 - C1 -2JKO 5.4
80 PsiBlast_CBE 61.8745%-102 * C1 *2ETM 6.5
93 PsiBlast_CBE 61.8645%-103 - C1 -4D58 5.5 ?
106 PsiBlast_CBE 61.8345%-104 - C1 -2JKK 6.0 ?
77 PsiBlast_CBE 61.8245%-105 - C1 -3BZ3 6.1
108 PsiBlast_CBE 61.7745%-107 - C1 -2J0K 7.3 FAK1_CHICK
63 PsiBlast_CBE 61.7645%-102 - C1 -4EBV 5.5
82 PsiBlast_CBE 61.4445%-105 - C1 -4KAO 9.5
83 PsiBlast_CBE 61.3745%-106 - C1 -4KAO 8.4 FAK1_HUMAN
79 PsiBlast_CBE 61.1845%-103 - C1 -2IJM 5.2 FAK1_HUMAN
98 PsiBlast_CBE 61.1345%-105 - C1 -4D4V 4.1
88 PsiBlast_CBE 61.0645%-102 - C1 -2J0J 8.1 FAK1_CHICK
75 PsiBlast_CBE 61.0145%-103 - C1 -2JKQ 6.1
71 PsiBlast_CBE 60.8145%-103 - C1 -4Q9S 3.6
104 PsiBlast_CBE 60.4945%-102 - C1 -4BRX 6.0 FAK1_CHICK
110 PsiBlast_CBE 60.4845%-108 - C1 -4CSV 10.8 ?
81 PsiBlast_CBE 60.4845%-103 - C1 -2ETM 5.8 FAK1_HUMAN
64 PsiBlast_CBE 60.3345%-102 - C1 -4KAB 3.1
66 PsiBlast_CBE 60.1845% -95 - C1 -4K9Y 8.6
72 PsiBlast_CBE 60.1345%-104 - C1 -4I4F 7.3
67 PsiBlast_CBE 59.9145% -97 - C1 -4K8A 4.0
84 PsiBlast_CBE 59.8445%-104 - C1 -4GU6 5.3
62 PsiBlast_CBE 59.8345%-104 - C1 -4EBW 6.1
69 PsiBlast_CBE 59.4345%-101 - C1 -4GU9 4.8
111 PsiBlast_CBE 57.8047% -99 - C1 -3GEQ 6.2 SRC_CHICK
85 PsiBlast_CBE 56.1245% -92 - C1 -4GU6 5.9 FAK1_HUMAN
109 PsiBlast_CBE 54.4745% -96 - C1 -4UEU 3.7 ?