@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MAPK5_HUMAN: (2015-10-13 )
MSEESDMDKAIKETSILEEYSINWTQKLGAGISGPVRVCVKKSTQERFALKILLDRPKARNEVRLHMMCATHPNIVQIIEVFANSVQFPHESSPRARLLIVMEMMEGGELFHRISQHRHFTEKQASQVTKQIALALRHCHLLNIAHRDLKPENLLFKDNSLDAPVKLCDFGFAKIDQGDLMTPQFTPYYVAPQVLEAQRRHQKEKSGIIPTSPTPYTYNKSCDLWSLGVIIYVMLCGYPPFYSKHHSRTIPKDMRRKIMTGSFEFPEEEWSQISEMAKDVVRKLLKVKPEERLTIEGVLDHPWLNSTEALDNVLPSAQLMMDKAVVAGIQQAHAEQLANMRIQDLKVSLKPLHSVNNPILRKRKLLGTKPKDSVYIHDHENGAEDSNVALEKLRDVIAQCILPQAGKGENEDEKLNEVMQEAWKYNRECKLLRDTLQSFSWNGRGFTDKVDRLKLAEIVKQVIEEQTTSHESQ

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P4O_A_2(3FHR)
MAPK3_HUMAN
[Raw transfer]




I85_A_2(3SHE)
MAPK3_HUMAN
[Raw transfer]




L8I_A_2(3M2W)
MAPK2_HUMAN
[Raw transfer]




HGF_A_3(3M42)
MAPK2_HUMAN
[Raw transfer]




P4O_A_4(3R2Y)
MAPK2_HUMAN
[Raw transfer]




B18_A_5(2PZY)
MAPK2_HUMAN
[Raw transfer]




05B_A_2(3R1N)
MAPK3_HUMAN
[Raw transfer]




LX9_A_3(3KGA)
MAPK2_HUMAN
[Raw transfer]




F10_A_2(3FXW)
MAPK3_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




STU_C_7(2PZY)
MAPK2_HUMAN
[Raw transfer]




B98_X_2(3FYK)
MAPK2_HUMAN
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




B97_X_2(3FYJ)
MAPK2_HUMAN
[Raw transfer]




B18_B_6(2PZY)
MAPK2_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ADP_B_2(1NY3)
MAPK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




ANP_A_3(3KN5)
KS6A5_HUMAN
[Raw transfer]




DRK_A_2(3F3Z)
?
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




F10_X_2(2P3G)
MAPK2_HUMAN
[Raw transfer]




STU_A_3(2HW7)
MKNK2_HUMAN
[Raw transfer]




ANP_B_4(3KN5)

[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




MK3_A_2(3KA0)
MAPK2_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




60 PsiBlast_CBE 78.9343%-106 - C2 -2PZY 7.2 MAPK2_HUMAN
20 PsiBlast_PDB 78.7543%-107 - C2 -3KA0 6.2 MAPK2_HUMAN
2 PsiBlast_PDB 76.2242%-113 - C2 -1NY3 4.9 MAPK2_HUMAN
12 PsiBlast_PDB 76.0343%-112 - C2 -3R2Y 7.8 MAPK2_HUMAN
61 PsiBlast_CBE 75.7743%-109 - C2 -2PZY 6.9 MAPK2_HUMAN
75 PsiBlast_CBE 75.4342%-103 - C2 -3R1N 8.1 MAPK3_HUMAN
73 PsiBlast_CBE 75.2242%-105 - C2 -3FHR 8.5 MAPK3_HUMAN
9 PsiBlast_PDB 75.0543%-103 - C2 -3FYK 4.5 MAPK2_HUMAN
124 HHSearch 74.6946%-106 - C2 -1NXK 7.7 MAPK2_HUMAN
140 HHSearch 74.3142%-120 - C2 -3F3Z 5.7 ?
13 PsiBlast_PDB 73.9843%-106 - C2 -2PZY 6.2 MAPK2_HUMAN
6 PsiBlast_PDB 73.7741%-106 - C2 -1NXK 7.7 MAPK2_HUMAN
74 PsiBlast_CBE 73.3942%-106 - C2 -3SHE 7.7 MAPK3_HUMAN
8 PsiBlast_PDB 73.3043%-101 - C2 -3FYJ 5.0 MAPK2_HUMAN
7 PsiBlast_PDB 73.1643%-107 - C2 -2P3G 6.0 MAPK2_HUMAN
72 PsiBlast_CBE 71.2242%-106 - C2 -3FXW 8.0 MAPK3_HUMAN
76 PsiBlast_CBE 70.0040% -98 - C2 -3M42 7.6 MAPK2_HUMAN
77 PsiBlast_CBE 69.7140% -95 - C2 -3M2W 7.2 MAPK2_HUMAN
78 PsiBlast_CBE 69.3140% -97 - C2 -3KGA 7.9 MAPK2_HUMAN
80 PsiBlast_CBE 67.8436%-123 - C2 -3KN5 4.2 KS6A5_HUMAN
142 HHSearch 67.7336%-112 - C2 -1PHK 5.7 PHKG1_RABIT
79 PsiBlast_CBE 64.4436%-118 - C2 -3KN5 3.9
129 HHSearch 64.1135%-114 - C2 -3C0I 3.2 CSKP_HUMAN
87 PsiBlast_CBE 62.6136%-113 - C2 -2JAM 6.7 KCC1G_HUMAN
86 PsiBlast_CBE 60.5436%-109 - C2 -2JAM 6.2 KCC1G_HUMAN
103 PsiBlast_CBE 59.5134%-120 - C2 -2WEI 7.1 ?
84 PsiBlast_CBE 58.9132% -91 - C2 -2WNT -
105 PsiBlast_CBE 58.5934%-115 - C2 -2HW7 7.2 MKNK2_HUMAN
98 PsiBlast_CBE 57.8235%-123 - C2 -4FG7 4.4 KCC1A_HUMAN
91 PsiBlast_CBE 56.0435%-113 - C2 -2W4O 5.5 KCC4_HUMAN
96 PsiBlast_CBE 54.7635%-112 - C2 -4FG8 4.3 KCC1A_HUMAN
97 PsiBlast_CBE 53.3635%-119 - C2 -4FG8 5.7 KCC1A_HUMAN