@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MYLK_HUMAN: (2015-10-15 )
MGDVKLVASSHISKTSLSVDPSRVDSMPLTEAPAFILPPRNLCIKEGATAKFEGRVRGYPEPQVTWHRNGQPITSGGRFLLDCGIRGTFSLVIHAVHEEDRGKYTCEATNGSGARQVTVELTVEGSFAKQLGQPVVSKTLGDRFSAPAVETRPSIWGECPPKFATKLGRVVVKEGQMGRFSCKITGRPQPQVTWLKGNVPLQPSARVSVSEKNGMQVLEIHGVNQDDVGVYTCLVVNGSGKASMSAELSIQGLDSANRSFVRETKATNSDVRKEVTNVISKESKLDSLEAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDSPRTAPQTPVLQKTSSSITLQAARVQPEPRAPGLGVLSPSGEERKRPAPPRPATFPTRQPGLGSQDVVSKAANRRIPMEGQRDSAFPKFESKPQSQEVKENQTVKFRCEVSGIPKPEVAWFLEGTPVRRQEGSIEVYEDAGSHYLCLLKARTRDSGTYSCTASNAQGQLSCSWTLQVERLAVMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVHEKKSSRKSEYLLPVAPSKPTAPIFLQGLSDLKVMDGSQVTMTVQVSGNPPPEVIWLHNGNEIQESEDFHFEQRGTQHSLCIQEVFPEDTGTYTCEAWNSAGEVRTQAVLTVQEPHDGTQPWFISKPRSVTASLGQSVLISCAIAGDPFPTVHWLRDGKALCKDTGHFEVLQNEDVFTLVLKKVQPWHAGQYEILLKNRVGECSCQVSLMLQNSSARALPRGREPASCEDLCGGGVGADGGGSDRYGSLRPGWPARGQGWLEEEDGEDVRGVLKRRVETRQHTEEAIRQQEVEQLDFRDLLGKKVSTKTLSEDDLKEIPAEQMDFRANLQRQVKPKTVSEEERKVHSPQQVDFRSVLAKKGTSKTPVPEKVPPPKPATPDFRSVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAGTTDNEKRSESQGTAPAFKQKLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLCSVSIEKALPEDRGLYKCVAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSSLPPVLGTESDATVKKKPAPKTPPKAAMPPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGTPCASDIRSSSLTLSWYGSSYDGGSAVQSYSIEIWDSANKTWKELATCRSTSFNVQDLLPDHEYKFRVRAINVYGTSEPSQESELTTVGEKPEEPKDEVEVSDDDEKEPEVDYRTVTINTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISDDAKDFISNLLKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKLSKDRMKKYMARRKWQKTGNAVRAIGRLSSMAMISGLSGRKSSTGSPTSPLNAEKLESEEDVSQAFLEAVAEEKPHVKPYFSKTIRDLEVVEGSAARFDCKIEGYPDPEVVWFKDDQSIRESRHFQIDYDEDGNCSLIISDVCGDDDAKYTCKAVNSLGEATCTAELIVETMEEGEGEGEEEEE

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ACP_B_10(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




38G_A_2(4TXC)
DAPK1_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




EBD_A_2(3LM0)
ST17B_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




DRK_A_2(3F3Z)
?
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




16X_B_8(2X4F)
MYLK4_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




PGE_A_2(4UV0)
?
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




9 PsiBlast_PDB 71.4744% -63 - C6 -2W4K 5.8 DAPK1_HUMAN
24 PsiBlast_CBE 71.3944% -74 - C6 -2YAA 6.0 DAPK2_MOUSE
27 PsiBlast_CBE 71.2643% -71 - C6 -2CKE 4.1 DAPK2_HUMAN
8 PsiBlast_PDB 70.9443% -75 - C6 -2CKE 4.0 DAPK2_HUMAN
28 PsiBlast_CBE 70.5443% -74 - C6 -2CKE 4.1 DAPK2_HUMAN
4 PsiBlast_PDB 70.4952% -85 - C6 -2X4F 6.2 MYLK4_HUMAN
22 PsiBlast_CBE 70.4752% -89 - C6 -2X4F 5.9 MYLK4_HUMAN
6 PsiBlast_PDB 70.3544% -73 - C6 -2YAA 5.5 DAPK2_MOUSE
40 PsiBlast_CBE 69.8046% -70 - C6 -4TXC 8.6 DAPK1_HUMAN
45 PsiBlast_CBE 69.5946% -72 - C6 -2YAK 9.6 DAPK1_HUMAN
11 PsiBlast_PDB 69.4944% -57 - C6 -4B4L 2.7 DAPK1_HUMAN
26 PsiBlast_CBE 69.3043% -73 - C6 -2CKE 4.1 DAPK2_HUMAN
20 PsiBlast_PDB 69.1145% -64 - C6 -4UV0 2.0 ?
16 PsiBlast_PDB 68.9845% -59 - C6 -2Y0A 2.5 DAPK1_HUMAN
47 PsiBlast_CBE 68.8346% -68 - C6 -1WVY 8.0 DAPK1_HUMAN
46 PsiBlast_CBE 68.7146% -64 - C6 -2W4J 5.6 DAPK1_HUMAN
19 PsiBlast_PDB 67.3543% -56 - C6 -2XUU 5.9 DAPK1_HUMAN
41 PsiBlast_CBE 66.9746% -76 - C6 -3ZXT 4.6 DAPK1_HUMAN
42 PsiBlast_CBE 65.9446% -76 - C6 -3ZXT 5.1 DAPK1_HUMAN
44 PsiBlast_CBE 65.5246% -71 - C6 -3ZXT 4.9 DAPK1_HUMAN
43 PsiBlast_CBE 65.0146% -69 - C6 -3ZXT 5.4 DAPK1_HUMAN
83 PsiBlast_CBE 64.9333% -71 - C6 -3F3Z 6.3 ?
88 PsiBlast_CBE 64.3631% -68 - C6 -3MFR 3.7 CSKP_HUMAN
54 PsiBlast_CBE 63.8538% -67 - C6 -4FG8 4.7 KCC1A_HUMAN
87 PsiBlast_CBE 63.6931% -68 - C6 -3MFS 4.1 CSKP_HUMAN
58 PsiBlast_CBE 63.4640% -80 - C6 -4FG7 4.3 KCC1A_HUMAN
86 PsiBlast_CBE 63.3331% -67 - C6 -3MFU 4.5 CSKP_HUMAN
65 PsiBlast_CBE 62.8733% -72 - C6 -2WEL 5.2 KCC2D_HUMAN
60 PsiBlast_CBE 62.7337% -75 - C6 -3LM0 5.5 ST17B_HUMAN
59 PsiBlast_CBE 62.6937% -75 - C6 -3LM5 5.5 ST17B_HUMAN
74 PsiBlast_CBE 62.6533% -58 - C6 -2V7O 5.9 KCC2G_HUMAN
67 PsiBlast_CBE 62.5434% -61 - C6 -2VN9 6.3 KCC2D_HUMAN
85 PsiBlast_CBE 62.1632% -61 - C6 -3BHH 5.0 KCC2B_HUMAN
56 PsiBlast_CBE 61.9836% -61 - C6 -2JC6 6.4 KCC1D_HUMAN
66 PsiBlast_CBE 61.5734% -60 * C6 *2VN9 6.4 KCC2D_HUMAN
84 PsiBlast_CBE 61.5332% -62 - C6 -3BHH 5.5 KCC2B_HUMAN
57 PsiBlast_CBE 61.5236% -59 - C6 -2JC6 6.3 KCC1D_HUMAN
55 PsiBlast_CBE 61.2538% -70 - C6 -4FG8 6.0 KCC1A_HUMAN
52 PsiBlast_CBE 60.3637% -62 - C6 -4FG9 5.7 KCC1A_HUMAN
53 PsiBlast_CBE 59.9537% -55 - C6 -4FG9 5.3 KCC1A_HUMAN
61 PsiBlast_CBE 59.8336% -51 - C6 -2W4O 3.7 KCC4_HUMAN
63 PsiBlast_CBE 58.4735% -57 - C6 -2JAM 4.4 KCC1G_HUMAN
62 PsiBlast_CBE 57.7135% -58 - C6 -2JAM 4.1 KCC1G_HUMAN
106 PsiBlast_CBE 57.7034% -55 - C6 -3MA6 4.0 ?
69 PsiBlast_CBE 57.3337% -57 - C6 -2WEI 6.0 ?
105 PsiBlast_CBE 54.8034% -55 - C6 -3MA6 5.7 ?