@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1425: (2016-03-25 )
MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKLIEASVGEKDVVTTSRFPGTTLDMIDIPLDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDLNELKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVVLRNSIL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DGI_A_2(3H2Y)
?
[Raw transfer]



DGI_A_2(3H2Y)
?
[Raw transfer]



GNP_A_3(1PUJ)
RBGA_BACSU
[Raw transfer]



GDP_B_4(3EC1)
?
[Raw transfer]



GDP_A_3(3EC1)
?
[Raw transfer]



GDP_A_3(3EC1)
?
[Raw transfer]



GDP_A_3(3EC1)
?
[Raw transfer]



GNP_A_2(3CNL)
RBGA_THEMA
[Raw transfer]



GNP_A_4(3IEV)
ERA_AQUAE
[Raw transfer]



GNP_A_3(1WF3)
ERA_THET8
[Raw transfer]



GDP_A_3(3PQC)
ENGB_THEMA
[Raw transfer]



GDP_B_2(1SVI)
ENGB_BACSU
[Raw transfer]
49 HHSearch 95.9753%-121 - C7 -3H2Y 7.2 ?
1 PsiBlast_PDB 94.4252%-120 - C7 -3H2Y 7.2 ?
21 PsiBlast_CBE 94.2350%-120 - C7 -3EC1 5.3 ?
48 HHSearch 94.1451%-119 - C7 -3EC1 5.0 ?
2 PsiBlast_PDB 93.8650%-119 - C7 -3EC1 5.0 ?
73 Fugue 93.8550%-119 - C7 -3EC1 5.0 ?
50 HHSearch 58.9626%-102 - C7 -1PUJ 7.4 RBGA_BACSU
51 HHSearch 52.8824% -78 - C7 -2YV5 - RSGA_AQUAE -
53 HHSearch 51.1524% -70 - C7 -1U0L - RSGA_THEMA -
52 HHSearch 48.5929% -77 - C7 -3CNL 7.3 RBGA_THEMA
57 HHSearch 48.1422% -87 - C7 -2RCN - RSGA_SALTY -
6 PsiBlast_PDB 47.8228% -61 - C7 -3CNO - RBGA_THEMA -
5 PsiBlast_PDB 46.8728% -60 - C7 -3CNN - RBGA_THEMA -
4 PsiBlast_PDB 46.1128% -58 - C7 -3CNL - RBGA_THEMA -
74 Fugue 45.5516% -37 - C7 -1PUJ - RBGA_BACSU -
77 Fugue 43.5517% -45 - C7 -1U0L - RSGA_THEMA -
9 PsiBlast_PDB 42.7727% -56 - C7 -1MKY - DER_THEMA -
70 HHSearch 42.4117% -60 - C7 -3IEV - ERA_AQUAE -
54 HHSearch 42.1920% -61 - C7 -1T9H - RSGA_BACSU -
76 Fugue 41.7915% -29 * C6 *2QTH - HFLX_SULSO -
60 HHSearch 33.9238% -41 - C7 -1WF3 8.2 ERA_THET8
58 HHSearch 33.5738% -28 * C7 *3IEV 8.2 ERA_AQUAE
67 HHSearch 31.3230% -33 - C7 -1SVI 4.8 ENGB_BACSU
64 HHSearch 29.3831% -26 - C7 -3PQC 6.2 ENGB_THEMA