@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1518: (2016-03-26 )
MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEELAHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYERAMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVDAYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAEEKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIGETNRKYIPLEERK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMX_E_5(1CSH)
CISY_CHICK
[Raw transfer]



COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



CIT_E_5(1A59)
PRPC_ABDS2
[Raw transfer]



CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]
77 HHSearch 97.6145% -85 - C8 -1IOM 3.1 ?
1 PsiBlast_PDB 97.0344% -85 - C8 -1IOM 3.1 ?
2 PsiBlast_PDB 96.2244% -89 - C8 -1IXE - ? -
88 HHSearch 95.9940% -90 - C8 -2IBP - ? -
97 Fugue 95.7342% -97 * C8 *1AJ8 7.0 CISY_PYRFU
78 HHSearch 95.4442% -91 - C8 -1AJ8 7.0 CISY_PYRFU
32 PsiBlast_CBE 95.1638% -90 - C8 -2IBP - ? -
4 PsiBlast_PDB 95.1340% -92 - C8 -1AJ8 - CISY_PYRFU -
9 PsiBlast_PDB 95.0338% -92 - C8 -2IBP - ? -
22 PsiBlast_CBE 94.8544% -90 - C8 -1IXE - ? -
83 HHSearch 94.7942% -97 - C8 -1VGP - ? -
21 PsiBlast_CBE 94.7544% -86 - C8 -1IXE - ? -
23 PsiBlast_CBE 94.4744% -86 - C8 -1IXE - ? -
24 PsiBlast_CBE 94.2640% -93 - C8 -1AJ8 7.9 CISY_PYRFU
89 HHSearch 93.7539% -85 - C8 -1A59 7.4 PRPC_ABDS2
3 PsiBlast_PDB 93.6841% -95 - C8 -1VGP - ? -
41 PsiBlast_CBE 93.3037% -93 - C8 -2H12 - CISY_ACEAC -
84 HHSearch 93.1639% -85 - C8 -1VGM 2.2 ?
90 HHSearch 93.0638% -89 - C8 -2H12 - CISY_ACEAC -
44 PsiBlast_CBE 92.8937% -91 - C8 -2H12 - CISY_ACEAC -
8 PsiBlast_PDB 92.6638% -82 - C8 -1VGM 2.2 ?
7 PsiBlast_PDB 92.6238% -87 - C8 -1A59 7.4 PRPC_ABDS2
81 HHSearch 90.1938% -92 - C8 -2P2W 3.8 ?
10 PsiBlast_PDB 88.8837% -95 - C8 -2P2W 3.8 ?