@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1926: (2016-03-30 )
MAQEVIKIRGGRTLNGEVNISGAKNSAVAIIPATLLAQGHVKLEGLPQISDVKTLVSLLEDLNIKASLNGTELEVDTTEIQNAALPNNKVESLRASYYMMGAMLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGAEIDESSTTSMKIEAKELKGAHIFLDMVSVGATINIMLAAVYATGQTVIENAAKEPEVVDVANFLTSMGANIKGAGTSTIKINGVKELHGSEYQVIPDRIEAGTYMCIAAACGENVILNNIVPKHVETLTAKFSELGVNVDVRDERIRINNNAPYQFVDIKTLVYPGFATDLQQPITPLLFMANGPSFVTDTIYPERFKHVEELKRMGANIEVDEGTATIKPSTLHGAEVYASDLRAGACLIIAGLIAEGVTTIYNVKHIYRGYTDIVEHLKALGADIWTETV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_6(2RL2)
MURA_HAEIN
[Raw transfer]



UD1_D_4(1UAE)
MURA_ECOLI
[Raw transfer]



UD1_A_3(2RL1)
MURA_HAEIN
[Raw transfer]



TET_D_4(1A2N)
MURA_ECOLI
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



PEG_A_3(3ZH4)
?
[Raw transfer]



FLC_A_2(3ZH4)
?
[Raw transfer]



FLC_A_2(3ZH4)
?
[Raw transfer]



FCN_G_7(1UAE)
MURA_ECOLI
[Raw transfer]



GG6_A_5(2RL2)
MURA_HAEIN
[Raw transfer]
1 PsiBlast_PDB 98.5352%-125 - C6 -3ZH3 - ? -
2 PsiBlast_PDB 96.6152%-124 - C6 -3ZH4 4.1 ?
42 HHSearch 93.7851%-117 - C6 -3ZH4 4.1 ?
5 PsiBlast_PDB 92.3145%-116 - C6 -3R38 - MURA1_LISMO -
25 PsiBlast_CBE 90.0043%-120 - C6 -3VCY - MURA_VIBFM -
28 PsiBlast_CBE 89.9444%-115 - C6 -5BQ2 - ? -
26 PsiBlast_CBE 89.8544%-114 - C6 -5BQ2 - ? -
9 PsiBlast_PDB 89.8344%-115 - C6 -5BQ2 - ? -
21 PsiBlast_CBE 89.5947%-108 - C6 -3SG1 - MURA1_BACAN -
27 PsiBlast_CBE 89.4144%-112 - C6 -5BQ2 - ? -
3 PsiBlast_PDB 89.3647%-107 - C6 -3SG1 - MURA1_BACAN -
8 PsiBlast_PDB 89.1943%-117 - C6 -3VCY - MURA_VIBFM -
13 PsiBlast_PDB 89.0741%-103 - C6 -2RL2 6.6 MURA_HAEIN
24 PsiBlast_CBE 88.7843%-117 - C6 -3VCY - MURA_VIBFM -
12 PsiBlast_PDB 88.6841%-106 - C6 -2RL1 7.0 MURA_HAEIN
43 HHSearch 88.6345%-111 - C6 -3R38 - MURA1_LISMO -
23 PsiBlast_CBE 87.9643%-117 - C6 -3VCY - MURA_VIBFM -
11 PsiBlast_PDB 87.3143%-112 - C6 -4R7U - MURA_VIBCH -
30 PsiBlast_CBE 87.1343%-113 - C6 -4R7U - MURA_VIBCH -
31 PsiBlast_CBE 86.8543%-114 - C6 -4R7U - MURA_VIBCH -
10 PsiBlast_PDB 85.5042%-112 - C6 -1A2N 8.1 MURA_ECOLI
6 PsiBlast_PDB 85.2742%-112 - C6 -1UAE 7.7 MURA_ECOLI
14 PsiBlast_PDB 83.4740%-110 - C6 -2YVW 6.1 MURA_AQUAE
50 HHSearch 80.0937%-100 - C6 -2YVW 5.5 MURA_AQUAE