@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2070: (2016-03-31 )
MGEHQNVKLNRTVKAAVLTVSDTRDFVTDKGGQCVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEIEGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(1UUY)

[Raw transfer]




PEG_B_9(3IWT)
?
[Raw transfer]




GOL_A_6(3IWT)
?
[Raw transfer]




GOL_A_6(3IWT)
?
[Raw transfer]




PEG_C_15(3IWT)
?
[Raw transfer]




EDO_A_4(3MCI)
?
[Raw transfer]




GOL_B_10(3IWT)
?
[Raw transfer]




FMT_A_6(2IS8)
?
[Raw transfer]




EDO_C_10(3MCI)
?
[Raw transfer]




40 HHSearch 96.4252%-121 - C3 -1Y5E - MOAB_BACCR -
1 PsiBlast_PDB 92.4251%-105 - C3 -1Y5E - MOAB_BACCR -
28 PsiBlast_CBE 88.1337%-123 - C3 -2IS8 - ? -
29 PsiBlast_CBE 88.0837%-126 - C3 -2IS8 - ? -
27 PsiBlast_CBE 87.9837%-122 - C3 -3MCH - ? -
8 PsiBlast_PDB 87.7137%-122 - C3 -3MCH - ? -
7 PsiBlast_PDB 87.6537%-122 - C3 -2IS8 - ? -
41 HHSearch 86.6536%-112 - C3 -3IWT 2.7 ?
10 PsiBlast_PDB 86.5733%-118 - C3 -1JLJ - GEPH_HUMAN -
25 PsiBlast_CBE 86.5640%-117 - C3 -4LHB - MOAB_PYRFU -
43 HHSearch 86.3637%-119 - C3 -2IS8 2.7 ?
12 PsiBlast_PDB 86.3133%-112 - C3 -1UUX - -
30 PsiBlast_CBE 86.3033%-118 - C3 -1JLJ - GEPH_HUMAN -
26 PsiBlast_CBE 86.0440%-119 - C3 -4LHB - MOAB_PYRFU -
17 PsiBlast_PDB 85.3432%-115 - C3 -1UUY 3.3
20 PsiBlast_PDB 85.0132%-113 - C3 -1O8O - CNX1_ARATH -
11 PsiBlast_PDB 84.9833%-117 - C3 -1IHC - GEPH_RAT -
23 PsiBlast_CBE 84.8635%-118 - C3 -3IWT 2.8 ?
18 PsiBlast_PDB 84.7932%-110 - C3 -1O8N - CNX1_ARATH -
31 PsiBlast_CBE 84.7833%-117 - C3 -1JLJ - GEPH_HUMAN -
4 PsiBlast_PDB 84.3035%-116 - C3 -3IWT 2.9 ?
24 PsiBlast_CBE 84.0135%-116 - C3 -3IWT 3.3 ?
15 PsiBlast_PDB 75.7733% -93 - C3 -3MCI 2.9 ?
33 PsiBlast_CBE 74.7933% -98 - C3 -3MCI 2.9 ?