@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0568: (2015-12-16 )
MTFEPYPFERLRALFKEITPKKKGLDLGIGEPRFETPKFIQDALKSHTHSLNIYPKSAFEESLREAQRGFFKRRFKIELKENELVSTLGSREVLFNFPSFVLFDYPNPTIAYPNPFYQIYEGSAQFARAKSLLMPLVKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIAWVKLALKHDFILINDECYSEIYENTPPSSLLEACMLADNGAFKNVLVIHSLSKRSSAPGLRSGFIAGDSSLLEKYKAFRTYLGYTSANAIQKASEVAWLDDRHAEFFRNIYANNLKLARKIFKETLIYPYSFYAYLPVKDGENFAKTLYQNEGITTLPALYLGRNHIGADYVRLALVYDTSLLEKPLEIIEAYRENYA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPE_G_7(2DOU)
?
[Raw transfer]




PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




EDO_A_6(3EZS)
?
[Raw transfer]




EDO_A_6(3EZS)
?
[Raw transfer]




MES_A_3(3JTX)
?
[Raw transfer]




MES_A_3(3JTX)
?
[Raw transfer]




1 PsiBlast_PDB 99.8491%-104 - C1 -3EZS 3.3 ?
25 HHSearch 96.2689%-100 - C1 -3EZS 3.3 ?
2 PsiBlast_PDB 71.0737% -75 - C1 -3JTX 2.8 ?
29 HHSearch 70.0638% -85 - C1 -3JTX 2.1 ?
6 PsiBlast_PDB 62.9526% -83 - C1 -2X5D - ? -
35 HHSearch 62.3420% -63 - C1 -3H14 - ? -
34 HHSearch 62.2625% -79 - C1 -2X5D - ? -
3 PsiBlast_PDB 62.1226% -71 - C1 -1GDE - ? -
11 PsiBlast_PDB 61.7923% -81 - C1 -1J32 - ? -
4 PsiBlast_PDB 59.9726% -69 - C1 -1GD9 - ? -
39 HHSearch 59.1521% -72 - C1 -3E2Y - KAT3_MOUSE -
7 PsiBlast_PDB 57.2826% -75 - C1 -2O1B - ? -
26 HHSearch 57.0226% -68 - C1 -1GD9 - ? -
12 PsiBlast_PDB 55.9823% -65 - C1 -1BKG - AAT_THET8 -
32 HHSearch 54.9722% -66 - C1 -1B5P - AAT_THET8 -
41 HHSearch 54.9515% -68 - C1 -1C7N - ? -
27 HHSearch 54.8921% -69 * C1 *1O4S - AAT_THEMA -
28 HHSearch 54.5921% -71 - C1 -1J32 - ? -
18 PsiBlast_PDB 53.6423% -66 - C1 -1BJW - AAT_THET8 -
31 HHSearch 53.6221% -74 - C1 -2DOU 3.2 ?