@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0593: (2015-12-16 )
MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSHQEVKIKSLPQVVDIKAMALLLQNLGAELEWLNPHTLQLSAKSLHHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIGARPVDLHLKAMQQLGAEIKIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKGITRIINAAKEPEIAQLCAFLQSGGVEIEGVDSSELKIRGVESDALNLKDIQIIPDRIEAGTCLCVGAITNSQLKINHIIPNHIQAITDKLIEIGFPLDIQENSIEIYPAKKRQAFEITTKEYPGFPTDMQAQFMALATQCLGTSIIEETLFENRFMHASELQRLGANISLKTNVATISGSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKVNALGAKVLRLKEK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_D_4(1UAE)
MURA_ECOLI
[Raw transfer]




TET_D_4(1A2N)
MURA_ECOLI
[Raw transfer]




EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]




EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]




UD1_A_6(2RL2)
MURA_HAEIN
[Raw transfer]




FLC_A_2(3ZH4)
?
[Raw transfer]




FLC_A_2(3ZH4)
?
[Raw transfer]




FCN_G_7(1UAE)
MURA_ECOLI
[Raw transfer]




PEG_A_3(3ZH4)
?
[Raw transfer]




GG6_A_5(2RL2)
MURA_HAEIN
[Raw transfer]




23 PsiBlast_CBE 98.3547%-104 - C6 -5BQ2 - ? -
21 PsiBlast_CBE 97.5647%-104 - C6 -5BQ2 - ? -
1 PsiBlast_PDB 97.5147%-104 - C6 -5BQ2 - ? -
22 PsiBlast_CBE 97.2047%-103 - C6 -5BQ2 - ? -
3 PsiBlast_PDB 94.8246%-104 - C6 -1NAW - MURA_ENTCC -
26 PsiBlast_CBE 94.6844%-101 - C6 -4R7U - MURA_VIBCH -
25 PsiBlast_CBE 94.0944%-102 - C6 -4R7U - MURA_VIBCH -
8 PsiBlast_PDB 94.0844%-101 - C6 -4R7U - MURA_VIBCH -
5 PsiBlast_PDB 93.6646%-100 - C6 -2RL2 5.0 MURA_HAEIN
27 PsiBlast_CBE 93.4644%-102 - C6 -4R7U - MURA_VIBCH -
2 PsiBlast_PDB 93.4146%-107 - C6 -3SPB - MURA_ENTCC -
24 PsiBlast_CBE 93.3846%-108 - C6 -1NAW - MURA_ENTCC -
9 PsiBlast_PDB 93.2445%-100 - C6 -3VCY - MURA_VIBFM -
6 PsiBlast_PDB 92.7646% -98 - C6 -1UAE 6.9 MURA_ECOLI
30 PsiBlast_CBE 92.6245%-103 - C6 -3VCY - MURA_VIBFM -
4 PsiBlast_PDB 92.4246%-100 - C6 -2RL1 - MURA_HAEIN -
29 PsiBlast_CBE 92.4045%-102 - C6 -3VCY - MURA_VIBFM -
7 PsiBlast_PDB 91.8646%-100 - C6 -1A2N 8.9 MURA_ECOLI
28 PsiBlast_CBE 91.4645%-101 - C6 -3VCY - MURA_VIBFM -
10 PsiBlast_PDB 91.4143%-105 - C6 -2YVW 7.3 MURA_AQUAE
41 HHSearch 90.8142%-102 - C6 -2YVW 6.1 MURA_AQUAE
33 HHSearch 84.6136% -97 - C6 -3ZH4 4.1 ?
13 PsiBlast_PDB 83.5636% -97 - C6 -3ZH4 4.1 ?