@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0671: (2015-12-17 )
MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDAKKADVILINTCGFIESAKQESIQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQNQFSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIGAIEDSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVGHPEENESEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIALKHQNHSFKALLNKPIKALVEHKEGEYFYKARDLRWAPEVDGEILINDSELTTPLKPGHYTIVPSAFKDNILLAKVLSPF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FS5_A_3(4JC0)
RIMO_THEMA
[Raw transfer]
39 Fugue 93.8037% -79 - C4 -4JC0 6.0 RIMO_THEMA
15 PsiBlast_CBE 87.5239% -73 - C4 -4JC0 - RIMO_THEMA -
1 PsiBlast_PDB 87.0339% -76 - C4 -4JC0 - RIMO_THEMA -
16 HHSearch 75.0738% -84 - C4 -2QGQ - RIMO_THEMA -
2 PsiBlast_PDB 72.1039% -89 - C4 -2QGQ - RIMO_THEMA -
41 Fugue 59.0617% -62 - C4 -4U0O - LIPA2_THEEB -
19 HHSearch 54.2617% -81 - C4 -1OLT - HEMN_ECOLI -
42 Fugue 53.6911% -51 - C4 -3T7V - PYLB_METBF -
18 HHSearch 52.3513% -63 * C4 *3T7V - PYLB_METBF -
23 HHSearch 49.1514% -73 - C4 -2A5H - KAMA_CLOSU -
22 HHSearch 48.5912% -77 - C4 -1TV8 - MOAA_STAA8 -
36 HHSearch 47.7216% -72 - C4 -2FTP - LIUE_PSEAE -
34 HHSearch 46.769% -68 - C4 -2XIJ - MUTA_HUMAN -
20 HHSearch 45.5413% -42 - C4 -1R30 - BIOB_ECOLI -
44 Fugue 45.5119% -38 - C2 -4R12 - ? -
35 HHSearch 44.1014% -50 - C4 -1YDO - HMGCL_BACSU -
45 Fugue 43.9919% -19 - C2 -4C88 - ? -
25 HHSearch 43.8110% -54 - C4 -3RFA - RLMN_ECOLI -
47 Fugue 42.0018% -52 - C2 -4FHL - YEKI_SCHPO -
43 Fugue 41.4715% -17 - C2 -4OC8 - ? -