@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1016: (2015-12-20 )
MEVSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYTLARSGKMLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQHPIKWVESFSSFNEQRSNFFEARVSNYAKGSVSFDDF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FEO_A_3(1RIB)
RIR2_ECOLI
[Raw transfer]



FEO_A_16(1YFD)
RIR2_ECOLI
[Raw transfer]



O_A_18(1PIU)
RIR2_ECOLI
[Raw transfer]
4 PsiBlast_PDB 96.5930% -97 - C3 -4D8F - RIR2_CHLTR -
3 PsiBlast_PDB 95.9630% -97 - C3 -1SYY - RIR2_CHLTR -
2 PsiBlast_PDB 95.2230% -96 - C3 -2ANI - RIR2_CHLTR -
6 PsiBlast_PDB 95.0530% -95 - C3 -4M1H - RIR2_CHLTR -
5 PsiBlast_PDB 94.4330% -96 - C3 -4D8G - RIR2_CHLTR -
7 PsiBlast_PDB 93.4330% -89 - C3 -4M1I - RIR2_CHLTR -
23 HHSearch 92.7830% -90 - C3 -1SYY - RIR2_CHLTR -
24 HHSearch 88.9025% -93 * C3 *1MXR - RIR2_ECOLI -
21 HHSearch 88.1031% -82 - C3 -2RCC - RIR2_BACHD -
1 PsiBlast_PDB 87.6230% -86 - C3 -2RCC - RIR2_BACHD -
15 PsiBlast_PDB 87.1124% -99 - C3 -1MXR - RIR2_ECOLI -
14 PsiBlast_PDB 86.6624% -97 - C3 -1JQC - RIR2_ECOLI -
12 PsiBlast_PDB 86.6624% -99 - C3 -1XIK - RIR2_ECOLI -
17 PsiBlast_PDB 86.6224% -98 - C3 -1PIU 2.8 RIR2_ECOLI
10 PsiBlast_PDB 86.1224% -98 - C3 -1PIY - RIR2_ECOLI -
8 PsiBlast_PDB 86.0624% -95 - C3 -1MRR - RIR2_ECOLI -
9 PsiBlast_PDB 85.8524% -95 - C3 -1RIB 3.2 RIR2_ECOLI
20 PsiBlast_PDB 85.8325% -98 - C3 -1PFR - RIR2_ECOLI -
18 PsiBlast_PDB 85.5124% -98 - C3 -1PIZ - RIR2_ECOLI -
16 PsiBlast_PDB 85.2724% -94 - C3 -1PIM - RIR2_ECOLI -