@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1406: (2015-12-23 )
MANITTKETPPTTPDLLKSPYQKIINASVSVFDETHGRSFFSPQFYEKIEPYLKEVLTHPIGLECDLNTAKKTNRLTPLKQLFKVCFDTEEVLIVNNNTSTVFLIANALAQQKEIIVSYGELVGGDFNLKDILLSSGARLHLVGNTNRAYLRDYRLALNENSKMLFKTHNPTFKKDTSFKDLQALAKEHGLIDYYNLGDVDLLNRTALEEILALKPSLVSFSADKSFNSAQAGIIMGQKEWVETLKNHPLYRALRVGKITLTLLFHSLNAWVNHQEEITIHALLHQTKDALLQKALKLYALLKPLELNVSIASSFSKIGNLPDKELESFCVKVQPKNTRALNCEKLYLKLFQKGVITRISCAFVCFEVFSLNGEDLEKIALVLKEILNKA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

THJ_A_3(3WCN)
SELA_AQUAE
[Raw transfer]



THJ_A_3(3WCN)
SELA_AQUAE
[Raw transfer]
9 PsiBlast_CBE 98.1331%-123 - C1 -3W1J - SELA_AQUAE -
14 PsiBlast_CBE 96.9531%-120 - C1 -3W1J - SELA_AQUAE -
4 PsiBlast_PDB 96.5631%-118 - C1 -3W1I - SELA_AQUAE -
15 PsiBlast_CBE 96.2831%-118 - C1 -3W1J - SELA_AQUAE -
1 PsiBlast_PDB 96.1831%-119 - C1 -3W1J - SELA_AQUAE -
10 PsiBlast_CBE 96.1531%-119 - C1 -3W1J - SELA_AQUAE -
13 PsiBlast_CBE 95.9331%-121 - C1 -3W1J - SELA_AQUAE -
11 PsiBlast_CBE 95.6131%-121 - C1 -3W1J - SELA_AQUAE -
16 PsiBlast_CBE 95.4731%-118 - C1 -3W1J - SELA_AQUAE -
6 PsiBlast_PDB 94.7031%-118 - C1 -3WCO - SELA_AQUAE -
18 HHSearch 94.5633%-118 - C1 -3WCO - SELA_AQUAE -
3 PsiBlast_PDB 94.5131%-121 - C1 -3W1K - SELA_AQUAE -
17 HHSearch 94.4333%-114 - C1 -3WCN 3.9 SELA_AQUAE
8 PsiBlast_CBE 94.3231%-121 - C1 -3W1J - SELA_AQUAE -
12 PsiBlast_CBE 94.2531%-116 - C1 -3W1J - SELA_AQUAE -
2 PsiBlast_PDB 93.9731%-120 - C1 -3W1H - SELA_AQUAE -
5 PsiBlast_PDB 93.6231%-118 - C1 -3WCN 3.9 SELA_AQUAE
37 HHSearch 52.6813% -78 - C1 -3WKR - SPSS_METJA -
27 HHSearch 49.8213% -72 - C1 -1EG5 - ? -
35 HHSearch 49.3912% -86 - C1 -1M32 - PHNW_SALTY -