@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0958: (2016-03-20 )
MIDKQSGIPIYIQIQSEIKKKMEDGVWKVGTSIPAERQLAEMFHVSRMTVRQAIQGLVDDNILQRRVGAGTFIAEKKLTERLEAVTSFTNLMLQEGKVPSTRIVSYGIRPASTQEQEALQLPENSNVMKIERIRYGDRVPILYEVAAIPEKIASLLTKEDIMDSLYKAIELKLGQPIGEAEQIMEASLVSEKIAPYLDVKLGSPVMKLRQITTLEDGRPFEFTRSQYVGSRFQFVARIKQ

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_F_6(4U0Y)
YVOA_BACSU
[Raw transfer]
-
EDO_B_19(4U0W)
YVOA_BACSU
[Raw transfer]



EDO_B_24(4U0V)
YVOA_BACSU
[Raw transfer]



EDO_B_17(4U0W)
YVOA_BACSU
[Raw transfer]



NACID_E_5(4U0Y)
YVOA_BACSU
[Raw transfer]
-
NACID_F_6(4U0Y)
YVOA_BACSU
[Raw transfer]
-
NACID_F_6(4U0Y)
YVOA_BACSU
[Raw transfer]
-
NACID_F_6(4U0Y)
YVOA_BACSU
[Raw transfer]
-
2 PsiBlast_PDB 89.1435% -76 - C1 -4U0W - YVOA_BACSU -
25 PsiBlast_CBE 89.0735% -82 - C1 -2WV0 - YVOA_BACSU -
26 PsiBlast_CBE 89.0535% -79 - C1 -2WV0 - YVOA_BACSU -
22 PsiBlast_CBE 88.6435% -75 - C1 -4U0W 2.8 YVOA_BACSU
1 PsiBlast_PDB 88.4735% -74 - C1 -4U0V - YVOA_BACSU -
3 PsiBlast_PDB 88.1735% -76 - C1 -2WV0 - YVOA_BACSU -
27 PsiBlast_CBE 88.1035% -82 - C1 -2WV0 - YVOA_BACSU -
29 PsiBlast_CBE 87.9735% -77 - C1 -2WV0 - YVOA_BACSU -
28 PsiBlast_CBE 87.7435% -75 - C1 -2WV0 - YVOA_BACSU -
30 PsiBlast_CBE 87.3335% -76 - C1 -2WV0 - YVOA_BACSU -
24 PsiBlast_CBE 87.1435% -78 - C1 -2WV0 - YVOA_BACSU -
21 PsiBlast_CBE 86.2835% -77 - C1 -4WWC - YVOA_BACSU -
23 PsiBlast_CBE 85.9335% -74 - C1 -4U0V 2.6 YVOA_BACSU
57 HHSearch 75.7923% -81 - C1 -3BWG - YYDK_BACSU -
6 PsiBlast_PDB 75.2623% -80 - C1 -3BWG - YYDK_BACSU -
79 Fugue 73.1722% -78 - C1 -3BWG - YYDK_BACSU -
32 PsiBlast_CBE 70.1043% -83 - C1 -3DDV - ? -
58 HHSearch 69.0526% -65 - C1 -3F8M - PHNF_MYCS2 -
78 Fugue 68.5226% -51 - C1 -3F8M - PHNF_MYCS2 -
31 PsiBlast_CBE 68.3643% -74 - C1 -3DDV - ? -
7 PsiBlast_PDB 58.0646%-112 - C1 -4U0Y 4.6 YVOA_BACSU
34 PsiBlast_CBE 57.6846%-112 - C1 -4U0Y 5.3 YVOA_BACSU
33 PsiBlast_CBE 55.2846%-104 - C1 -4U0Y 4.1 YVOA_BACSU
35 PsiBlast_CBE 54.9846%-106 - C1 -4U0Y 5.9 YVOA_BACSU