@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0309: (2015-11-30 )
MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVKQERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIEDNIFRIGQEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(4GT8)

[Raw transfer]
1 PsiBlast_PDB 89.3339% -81 - C2 -4GT8 6.2
3 PsiBlast_PDB 84.5726% -57 - C2 -3GIF - DESK_BACSU -
4 PsiBlast_PDB 83.8125% -58 - C2 -3EHF - DESK_BACSU -
6 PsiBlast_PDB 83.7225% -62 - C2 -3EHJ - DESK_BACSU -
5 PsiBlast_PDB 83.4825% -49 - C2 -3EHH - DESK_BACSU -
2 PsiBlast_PDB 81.8926% -51 - C2 -3GIG - DESK_BACSU -
32 HHSearch 75.3314% -31 - C2 -2E0A - PDK4_HUMAN -
34 HHSearch 73.2619% -3 - C- -2C2A - ? -
42 HHSearch 72.6025% -38 - C2 -1B3Q - CHEA_THEMA -
27 Fugue 71.9112% -39 - C2 -1GKZ - BCKD_RAT -
28 Fugue 70.5911% -20 - C2 -1JM6 - PDK2_RAT -
22 Fugue 67.5819% -64 - C2 -3EHG - -
47 HHSearch 66.0526% -47 * C2 *1I58 - CHEA_THEMA -
23 Fugue 63.5620% -50 - C2 -3ZXQ - DOST_MYCTU -
7 PsiBlast_PDB 63.2324% -50 - C2 -3EHG - -
46 HHSearch 61.5724% -23 - C2 -3SL2 - -
38 HHSearch 60.9022% -46 - C2 -3EHH - DESK_BACSU -
40 HHSearch 59.0622% -46 - C2 -3EHG - -
26 Fugue 58.6213% -33 - C2 -1ID0 - -
31 Fugue 54.5612% -52 - C1 -1T9K - MTNA_THEMA -