@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0327: (2015-11-30 )
MKVVKFGGSSLASSQQLYKVLNIIKSDYTRRFVVVSAPGKRYEEDLKMTDALIQYYQNYINGKDIVKDQTWIINRYQEIISDLSLGSTIAEEITRSIEQLASLPIENNQFLYDCFLAAGEDNNAKLVATFFNQNDIPARYVHPNEAGIIVTKEPCNARIIPGSYDKIENLCLYNEVLVIPGFFGVTEDNQICTFSRGGSDITGSLIAAGIKADLYENFTDVDGIFAAHPGVVKNPHAIPELTYKEMRELAYAGFSVLHDEALLPAYRDRIPLVIKNTNNPQQPGTKIVLKHTRSNIAVTGIASDSRFASINVSKYLMNREVGFGRKVLQILEDLNISFEHMPTGIDDLSIVLREKELTPIKEQEILNYLTRKLEVDYVDIQHNLSTIVIVGENMKSQIGVTATATQALSREKINITMISQGSSEVSIMFVINSKDEKRAIKALYETFFQK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_A_4(3C20)
AK_METJA
[Raw transfer]



ADP_A_4(2J0W)
AK3_ECOLI
[Raw transfer]



ASP_A_4(2J0X)
AK3_ECOLI
[Raw transfer]
21 HHSearch 91.7840%-103 - C1 -3TVI - ? -
1 PsiBlast_PDB 82.5128% -94 - C1 -2CDQ - AK1_ARATH -
3 PsiBlast_PDB 79.5828% -90 - C1 -3C1N - AK_METJA -
24 HHSearch 78.6327% -93 * C1 *3C1M - AK_METJA -
5 PsiBlast_PDB 78.1028% -87 - C1 -3C1M - AK_METJA -
2 PsiBlast_PDB 77.7928% -87 - C1 -2HMF - AK_METJA -
4 PsiBlast_PDB 77.6928% -87 - C1 -3C20 2.1 AK_METJA
44 Fugue 76.8226% -92 - C1 -2CDQ - AK1_ARATH -
7 PsiBlast_PDB 76.2526% -89 - C1 -2J0X 2.0 AK3_ECOLI
8 PsiBlast_PDB 75.1326% -84 - C1 -2J0W 4.4 AK3_ECOLI
43 Fugue 75.0727% -87 - C1 -3C1M - AK_METJA -
23 HHSearch 72.0926% -83 - C1 -2CDQ - AK1_ARATH -
26 HHSearch 71.4430% -94 - C1 -3L76 - ? -
22 HHSearch 69.1924% -75 - C1 -2J0W - AK3_ECOLI -
9 PsiBlast_PDB 63.9628% -95 - C1 -3AAW - AK_CORGL -
6 PsiBlast_PDB 56.8029% -87 - C1 -3L76 - ? -
10 PsiBlast_PDB 52.1327%-110 - C1 -2RE1 - ? -
13 PsiBlast_PDB 46.9723%-100 - C1 -4GO7 - -
15 PsiBlast_PDB 46.7623% -97 - C1 -3S1T - AK_MYCTU -
45 Fugue 46.3328% -94 - C1 -2DTJ - AK_CORGL -