@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0605: (2015-12-02 )
MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SEP_A_6(1L7P)
SERB_METJA
[Raw transfer]




AF3_A_9(1L7N)
SERB_METJA
[Raw transfer]




SER_F_6(1L8O)
SERB_HUMAN
[Raw transfer]




EDO_A_4(3P96)
SERB_MYCA1
[Raw transfer]




EDO_A_4(3P96)
SERB_MYCA1
[Raw transfer]




EDO_A_4(3P96)
SERB_MYCA1
[Raw transfer]




APO_D_4(1L8L)
SERB_HUMAN
[Raw transfer]




APO_C_3(1L8L)
SERB_HUMAN
[Raw transfer]




66 Fugue 94.8643%-102 * C2 *3P96 2.3 SERB_MYCA1
78 HHSearch 93.3144%-103 - C2 -3P96 2.3 SERB_MYCA1
1 PsiBlast_PDB 92.4645%-100 - C2 -3P96 2.3 SERB_MYCA1
7 PsiBlast_PDB 91.7742%-106 - C2 -3N28 - ? -
65 Fugue 91.3840% -99 - C2 -3N28 - ? -
75 HHSearch 91.2341%-101 - C2 -3N28 - ? -
3 PsiBlast_PDB 89.0644%-101 - C2 -1L7M - SERB_METJA -
21 PsiBlast_CBE 88.7345% -98 - C2 -1F5S - SERB_METJA -
4 PsiBlast_PDB 88.7244%-100 - C2 -1L7N 3.0 SERB_METJA
67 Fugue 88.1844%-101 - C2 -1F5S - SERB_METJA -
6 PsiBlast_PDB 88.0743%-103 - C2 -1L7P 4.2 SERB_METJA
2 PsiBlast_PDB 88.0545%-102 - C2 -1F5S - SERB_METJA -
76 HHSearch 87.7444% -97 - C2 -1L7M - SERB_METJA -
5 PsiBlast_PDB 87.1743%-106 - C2 -1L7O - SERB_METJA -
68 Fugue 84.9333%-111 - C2 -4EZE - ? -
22 PsiBlast_CBE 83.8635%-102 - C2 -4EZE - ? -
8 PsiBlast_PDB 81.0935%-103 - C2 -4EZE - ? -
77 HHSearch 79.7634% -90 - C2 -3M1Y - ? -
9 PsiBlast_PDB 78.8034% -89 - C2 -3M1Y - ? -
80 HHSearch 68.3431% -80 - C2 -1NNL - SERB_HUMAN -
24 PsiBlast_CBE 65.9532% -81 - C2 -1L8L 3.6 SERB_HUMAN
10 PsiBlast_PDB 65.1532% -80 - C2 -1L8L 2.2 SERB_HUMAN
23 PsiBlast_CBE 64.7632% -79 - C2 -1L8O 3.3 SERB_HUMAN