@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0745: (2015-12-02 )
MKELRSKLEKDYGIVFANQELLDTAFTHTSYANEHRLLNISHNERLEFLGDAVLQLLISQYLFTKYPQKAEGDLSKLRSMIVREESLAGFSRLCGFDHYIKLGKGEEKSGGRNRDTILGDLFEAFLGALLLDKGVEVVHAFVNKVMIPHVEKGTYERVKDYKTSLQELLQSHGDVKIDYQVTNESGPAHAKEFEVTVSVNQENLSQGIGRSKKAAEQDAAKNALATLQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A_D_16(4M30)
RNC_AQUAE
[Raw transfer]




A_C_12(4M30)
RNC_AQUAE
[Raw transfer]




C_C_9(4M2Z)
RNC_AQUAE
[Raw transfer]




C_D_12(4M2Z)
RNC_AQUAE
[Raw transfer]




NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]

-

NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]

-

NACID_D_3(2NUG)
RNC_AQUAE
[Raw transfer]

-

NACID_C_1(2NUG)
RNC_AQUAE
[Raw transfer]

-

A_D_16(4M30)
RNC_AQUAE
[Raw transfer]




51 HHSearch 85.5942% -71 - C2 -1O0W - RNC_THEMA -
1 PsiBlast_PDB 83.5541% -71 - C2 -1O0W - RNC_THEMA -
21 PsiBlast_CBE 82.9133% -92 - C2 -4M30 3.1 RNC_AQUAE
4 PsiBlast_PDB 82.8133% -94 - C2 -1YYK - RNC_AQUAE -
42 Fugue 82.6641% -73 - C2 -1O0W - RNC_THEMA -
9 PsiBlast_PDB 82.4433% -87 - C2 -4M2Z 2.8 RNC_AQUAE
10 PsiBlast_PDB 82.2633% -90 - C2 -4M30 4.0 RNC_AQUAE
13 PsiBlast_PDB 81.5532% -92 - C2 -1YYO - RNC_AQUAE -
22 PsiBlast_CBE 81.1433% -94 - C2 -4M2Z 2.8 RNC_AQUAE
23 PsiBlast_CBE 80.2633% -89 - C2 -2NUG 4.8 RNC_AQUAE
11 PsiBlast_PDB 80.1732% -93 - C2 -1YZ9 - RNC_AQUAE -
12 PsiBlast_PDB 80.1332% -88 - C2 -1RC7 - RNC_AQUAE -
28 PsiBlast_CBE 79.8532% -91 - C2 -1YYO - RNC_AQUAE -
8 PsiBlast_PDB 79.6533% -89 - C2 -2NUG 5.6 RNC_AQUAE
27 PsiBlast_CBE 79.6232% -90 - C2 -1YZ9 - RNC_AQUAE -
26 PsiBlast_CBE 79.6133% -92 - C2 -1YYK - RNC_AQUAE -
24 PsiBlast_CBE 79.6033% -94 - C2 -2NUF - RNC_AQUAE -
6 PsiBlast_PDB 79.5433% -82 - C2 -2NUE - RNC_AQUAE -
7 PsiBlast_PDB 79.4733% -89 * C2 *2NUF - RNC_AQUAE -
14 PsiBlast_PDB 78.8432% -87 - C2 -2EZ6 - RNC_AQUAE -
52 HHSearch 76.3234% -80 - C2 -2NUG 5.6 RNC_AQUAE