@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0753: (2015-12-02 )
MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDFAVSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRALQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEG_A_6(2I7G)
?
[Raw transfer]




19 HHSearch 99.9047% -97 - C5 -2I7G 3.4 ?
1 PsiBlast_PDB 99.2147% -95 - C5 -2I7G - ? -
23 HHSearch 76.2221% -77 - C5 -1EZW - MER_METKA -
24 HHSearch 73.1417% -86 - C5 -3RAO - ? -
7 PsiBlast_PDB 72.7023% -56 - C5 -1EZW - MER_METKA -
30 HHSearch 72.3023% -76 - C5 -1F07 - MER_METTM -
20 HHSearch 71.5219% -81 - C5 -1LUC - LUXA_VIBHA -
36 Fugue 70.0218% -72 - C5 -1LUC - LUXA_VIBHA -
22 HHSearch 69.9620% -77 - C5 -1Z69 - MER_METBF -
3 PsiBlast_PDB 69.7421% -69 - C5 -1BRL - LUXA_VIBHA -
4 PsiBlast_PDB 69.6421% -69 - C5 -1LUC - LUXA_VIBHA -
21 HHSearch 68.8715% -75 * C5 *1LUC - LUXB_VIBHA -
26 HHSearch 68.4018% -62 - C5 -1RHC - ? -
5 PsiBlast_PDB 67.3721% -63 - C5 -3FGC - LUXA_VIBHA -
29 HHSearch 66.7717% -83 - C5 -2B81 - ? -
25 HHSearch 65.4618% -68 - C5 -1NQK - SSUD_ECOLI -
38 Fugue 64.6817% -57 - C5 -1RHC - ? -
32 HHSearch 64.0816% -76 - C5 -3B9O - ? -
28 HHSearch 63.7221% -66 - C5 -3SDO - ? -
31 HHSearch 62.6516% -64 - C5 -1TVL - MOXC_BACSU -