@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0859: (2015-12-03 )
MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKESWQLYQEAIKIANKNQVPVVLDPVAAGASRFRLEVSLDLLKNYSISLLRGNGSEIAALVGEKQASKGADGGKVADLESIAVKANQVFDVPVVVTGETDAIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_12(1ESQ)
THIM_BACSU
[Raw transfer]




ATP_C_13(1ESQ)
THIM_BACSU
[Raw transfer]




ATP_A_11(1ESQ)
THIM_BACSU
[Raw transfer]




TZE_A_6(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_A_6(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_A_5(1C3Q)
THIM_BACSU
[Raw transfer]




TZE_B_7(1C3Q)
THIM_BACSU
[Raw transfer]




1 PsiBlast_PDB 97.1941%-111 - C2 -1C3Q 2.9 THIM_BACSU
17 PsiBlast_CBE 97.0441%-112 - C2 -1ESJ - THIM_BACSU -
41 Fugue 96.7140%-108 - C2 -1C3Q 2.9 THIM_BACSU
18 HHSearch 96.6442%-118 - C2 -1EKQ - THIM_BACSU -
16 PsiBlast_CBE 96.5141%-114 - C2 -1ESQ 5.8 THIM_BACSU
2 PsiBlast_PDB 96.4941%-110 - C2 -1ESJ - THIM_BACSU -
14 PsiBlast_CBE 96.4341%-113 - C2 -1C3Q 3.1 THIM_BACSU
13 PsiBlast_CBE 96.1741%-113 - C2 -1C3Q 3.1 THIM_BACSU
15 PsiBlast_CBE 95.9641%-112 - C2 -1ESQ 5.7 THIM_BACSU
3 PsiBlast_PDB 95.2541%-119 - C2 -1ESQ 5.0 THIM_BACSU
4 PsiBlast_PDB 94.5141%-116 - C2 -1EKQ - THIM_BACSU -
20 HHSearch 93.3338%-114 - C2 -3HPD - THIM_PYRHO -
5 PsiBlast_PDB 90.6638%-112 - C2 -3HPD - THIM_PYRHO -
19 HHSearch 76.8929% -92 - C2 -3DZV - THIM_ENTFA -
6 PsiBlast_PDB 75.0030% -83 - C2 -3DZV - THIM_ENTFA -
31 HHSearch 58.3818%-108 - C2 -3RM5 - THI20_YEAST -
34 HHSearch 52.0822%-111 - C2 -1JXH - THID_SALTY -
22 HHSearch 51.4816% -77 - C2 -2R3B - NNRD_ENTFA -
50 Fugue 50.3318% -63 - C2 -1JXH - THID_SALTY -
24 HHSearch 49.4419% -87 - C2 -3RSS - NNR_THEMA -