@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0921: (2015-12-04 )
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_B_6(3CEZ)
MSRB_BURP1
[Raw transfer]




ACY_A_5(3CEZ)
MSRB_BURP1
[Raw transfer]




P6G_A_6(3HCH)
MSRAB_NEIMA
[Raw transfer]




P6G_B_11(3HCH)

[Raw transfer]




CHAIN_G_7(3E0M)
MSAB1_STRPN
[Raw transfer]

-

CHAIN_F_6(3E0M)
MSAB1_STRPN
[Raw transfer]

-

CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]

-

CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]

-

22 HHSearch 97.2559% -93 - C6 -3HCG - MSRAB_NEIMA -
28 HHSearch 96.7156% -89 - C6 -3E0M 5.5 MSAB1_STRPN
4 PsiBlast_PDB 96.3755% -89 - C6 -3E0M 5.5 MSAB1_STRPN
23 HHSearch 95.9858% -90 - C6 -3E0O - MSRB_BACSU -
44 Fugue 95.6158% -95 * C6 *1L1D - MSRAB_NEIGO -
6 PsiBlast_PDB 95.3857% -84 - C6 -3E0O - MSRB_BACSU -
1 PsiBlast_PDB 95.1161% -91 - C6 -1L1D - MSRAB_NEIGO -
17 PsiBlast_CBE 94.8655% -82 - C6 -3E0M 4.1 MSAB1_STRPN
3 PsiBlast_PDB 93.8260% -83 - C6 -3HCH 4.1 MSRAB_NEIMA
2 PsiBlast_PDB 93.5860% -85 - C6 -3HCG - MSRAB_NEIMA -
16 PsiBlast_CBE 93.2955% -80 - C6 -3E0M 4.7 MSAB1_STRPN
15 PsiBlast_CBE 91.9260% -82 - C6 -3HCH 2.7
5 PsiBlast_PDB 86.1257% -61 - C6 -2KZN - MSRB_BACSU -
26 HHSearch 85.3350% -80 - C6 -3CXK - MSRB_BURP1 -
7 PsiBlast_PDB 84.6254% -86 - C6 -3CEZ 3.8 MSRB_BURP1
8 PsiBlast_PDB 84.4854% -85 - C6 -3CXK - MSRB_BURP1 -
18 PsiBlast_CBE 84.3954% -80 - C6 -3CXK - MSRB_BURP1 -
19 PsiBlast_CBE 84.3654% -82 - C6 -3CEZ 2.4 MSRB_BURP1
27 HHSearch 75.3236% -69 - C6 -3HCJ - ? -
10 PsiBlast_PDB 73.6941% -70 - C6 -3HCI - ? -