@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs0961: (2015-12-04 )
MLLEINHLEKVFRTRFSKEETRALQDVDFKVEQGEFIAIMGESGSGKTTLLNILATLEKPTNGQVILNGEDITKIKEAKLASFRLKNLGFVFQDFNLLDTLSVRDNIYLPLVLDRKRYKEMDHRLSELSSHLRIDDLLDKRPFELSGGQKQRVAIARSLITNPQILLADEPTAALDYRNSEDLLNLFETINLDGQTILMVTHSANAASHAKRVLFIKDGRIFHQLYRGNKNNSEFNKDISLTMSAILGGE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]
127 Fugue 88.7136% -92 - C1 -1Z47 - ? -
124 Fugue 86.3935% -92 - C1 -3TUZ - METN_ECOLI -
117 HHSearch 85.8141% -97 - C1 -2PCJ - LOLD_AQUAE -
27 PsiBlast_CBE 83.8037%-100 - C1 -3TUI - METN_ECOLI -
7 PsiBlast_PDB 83.3637%-101 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 82.9337%-104 - C1 -3TUZ - METN_ECOLI -
105 HHSearch 82.3937% -93 * C1 *3TUI - METN_ECOLI -
8 PsiBlast_PDB 82.2837%-106 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 82.0642% -99 - C1 -2PCJ - LOLD_AQUAE -
28 PsiBlast_CBE 81.2337% -98 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 81.0137%-102 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 80.9637%-100 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 80.7937%-101 - C1 -3TUZ - METN_ECOLI -
103 HHSearch 80.7836% -93 - C1 -1Z47 - ? -
6 PsiBlast_PDB 80.5138%-100 - C1 -3DHW - METN_ECOLI -
2 PsiBlast_PDB 79.8039% -94 - C1 -3TIF - Y796_METJA -
62 PsiBlast_CBE 79.5232% -81 - C1 -1OXU - ? -
5 PsiBlast_PDB 79.5139% -96 - C1 -1F3O 4.9 Y796_METJA
22 PsiBlast_CBE 79.3639% -96 - C1 -3TIF 4.9 Y796_METJA
1 PsiBlast_PDB 79.2437% -97 - C1 -1L2T - Y796_METJA -
32 PsiBlast_CBE 78.6838%-101 - C1 -4YMV 4.5 ?
33 PsiBlast_CBE 77.3338%-100 - C1 -4YMU 4.5 ?
15 PsiBlast_PDB 76.8138%-102 - C1 -4YMV 4.0 ?
21 PsiBlast_CBE 75.9837% -97 - C1 -1L2T 6.7 Y796_METJA
14 PsiBlast_PDB 75.8038%-100 - C1 -4YMU 5.0 ?