@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1047: (2015-12-05 )
MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_8(2ETJ)
RNH2_THEMA
[Raw transfer]




EDO_A_8(2ETJ)
RNH2_THEMA
[Raw transfer]




EDO_A_7(2ETJ)
RNH2_THEMA
[Raw transfer]




NACID_C_2(4HHT)
RNH2_THEMA
[Raw transfer]

-

NACID_C_2(4HHT)
RNH2_THEMA
[Raw transfer]

-

NACID_C_2(3O3H)
RNH2_THEMA
[Raw transfer]

-

NACID_C_2(3O3G)
RNH2_THEMA
[Raw transfer]

-

NACID_C_2(3O3F)
RNH2_THEMA
[Raw transfer]

-

33 Fugue 95.3748% -84 - C2 -4HHT 4.5 RNH2_THEMA
1 PsiBlast_PDB 92.4448% -97 - C2 -3O3G 5.2 RNH2_THEMA
23 HHSearch 92.3349% -97 - C2 -2ETJ 2.8 RNH2_THEMA
5 PsiBlast_PDB 92.1147% -97 - C2 -2ETJ 2.8 RNH2_THEMA
3 PsiBlast_PDB 91.9548% -99 - C2 -3O3H 6.1 RNH2_THEMA
2 PsiBlast_PDB 90.8748%-101 - C2 -3O3F 5.4 RNH2_THEMA
4 PsiBlast_PDB 89.8448%-107 - C2 -4HHT 4.5 RNH2_THEMA
9 PsiBlast_PDB 81.4029% -96 - C2 -2DFF - RNH2_THEKO -
7 PsiBlast_PDB 81.1430% -89 - C2 -1IO2 - RNH2_THEKO -
6 PsiBlast_PDB 79.7329% -86 - C2 -2DFH - RNH2_THEKO -
24 HHSearch 79.2726% -78 - C2 -1UAX - RNH2_PYRHO -
25 HHSearch 79.1731% -88 - C2 -1IO2 - RNH2_THEKO -
8 PsiBlast_PDB 78.6829% -84 - C2 -2DFE - RNH2_THEKO -
35 Fugue 78.6229% -86 * C2 *1IO2 - RNH2_THEKO -
10 PsiBlast_PDB 77.8629% -75 - C2 -1UAX - RNH2_PYRHO -
28 HHSearch 75.9230% -97 - C2 -1EKE - RNH2_METJA -
26 HHSearch 74.9323% -74 - C2 -1I39 - RNH2_ARCFU -
11 PsiBlast_PDB 74.2531% -96 - C2 -1X1P - RNH2_THEKO -
17 PsiBlast_PDB 73.3022% -86 - C2 -3PUF - RNH2A_HUMAN -
34 Fugue 72.5719% -57 - C2 -2D0B - ? -