@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1210: (2015-12-06 )
MKFNLEQVKVFENYEIENWEEGQVTLTTKVVDSSLNYYGNAHGGYLFTLCDQVSGLVAISTGYEAVTLQSNINYLRAGRLDDLLTVIGTCVHNGRTTKVVDVHIKNQKGEMVTTAIFTMFVTGERKEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_H_11(4ZRB)
?
[Raw transfer]



COA_D_11(3LBE)
?
[Raw transfer]



COA_D_11(3LBE)
?
[Raw transfer]



COA_G_10(4ZRB)
?
[Raw transfer]



COA_B_7(3LBE)
?
[Raw transfer]



COA_C_10(3LBE)
?
[Raw transfer]



COA_F_12(4ZRB)
?
[Raw transfer]



COA_C_10(3LBE)
?
[Raw transfer]



COA_E_9(4ZRB)
?
[Raw transfer]



COA_D_11(3LBE)
?
[Raw transfer]



COA_G_10(4ZRB)
?
[Raw transfer]



COA_E_9(4ZRB)
?
[Raw transfer]



COA_F_12(4ZRB)
?
[Raw transfer]
22 PsiBlast_CBE 98.9266%-116 - C1 -4ZRB 4.1 ?
21 PsiBlast_CBE 98.0066%-116 - C1 -4ZRB 3.7 ?
26 PsiBlast_CBE 97.3666%-114 - C1 -4ZRB 4.1 ?
27 PsiBlast_CBE 97.0766%-117 - C1 -4ZRB 3.2 ?
24 PsiBlast_CBE 96.9266%-121 - C1 -4ZRB 3.1 ?
25 PsiBlast_CBE 96.5166%-110 - C1 -4ZRB 3.2 ?
23 PsiBlast_CBE 96.0366%-119 - C1 -4ZRB 3.8 ?
2 PsiBlast_PDB 95.6566%-110 - C1 -4ZRB - ? -
86 HHSearch 94.5463%-114 - C1 -3LBE 4.1 ?
5 PsiBlast_PDB 94.4465%-117 - C1 -4XY5 - ? -
4 PsiBlast_PDB 94.0565%-121 - C1 -4XY6 - ? -
3 PsiBlast_PDB 93.8466%-121 - C1 -4ZRF - ? -
1 PsiBlast_PDB 92.9566%-122 - C1 -4I82 - ? -
29 PsiBlast_CBE 91.8162%-115 - C1 -3LBE 4.6 ?
7 PsiBlast_PDB 91.7762%-112 - C1 -3LBE 4.1 ?
6 PsiBlast_PDB 90.5862%-108 - C1 -3LBB - ? -
31 PsiBlast_CBE 90.4262%-110 - C1 -3LBB - ? -
30 PsiBlast_CBE 90.3962%-110 - C1 -3LBE 4.1 ?
28 PsiBlast_CBE 90.2862%-113 - C1 -3LBE 4.7 ?
13 PsiBlast_PDB 71.6925%-105 - C1 -4QD8 - Y1618_PSEAE -