@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1509: (2015-12-08 )
MVTIKDVAAKAGVNPSTVSRVLKDNASISSKTKERVKKAMEELGYVPNVAAQMLASGLTQNIGVIFPPLVLPDRLSEPFFMEILSTLTNEAKEHGFTVSIATSMSSEELLEQVKLMHLQKRVDGFIVLYSDQKDPIREYLLKYKLPFVVVGAANGYENEITYIDNDNQLMGKSAIDYLYKKGHKSIQFVTDDLNSEVSEERYLGYFKGARKLGLNQKPALLFDRGNPQVLEEFINRVKEEETTALIVIGDTVSVRVMQFLSFYKLKVPDDISIMTFNNSLFSHLIHPYLSTFDINVNNLGRTSVRRLIDIIKSPDKVFSETIIVPFTLEERESVRDISKNNN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(3HCW)
?
[Raw transfer]




12 PsiBlast_PDB 85.9526% -87 - C2 -1JFT - PURR_ECOLI -
7 PsiBlast_PDB 85.5627%-100 - C2 -1RZR - CCPA_BACME -
4 PsiBlast_PDB 85.1327%-101 - C2 -1ZVV - CCPA_BACSU -
40 HHSearch 84.9225% -88 - C2 -1QPZ - PURR_ECOLI -
9 PsiBlast_PDB 84.7427% -86 - C2 -1QP7 - PURR_ECOLI -
10 PsiBlast_PDB 83.7527% -83 - C2 -1QQA - PURR_ECOLI -
8 PsiBlast_PDB 83.2227% -84 - C2 -1BDH - PURR_ECOLI -
11 PsiBlast_PDB 82.9927% -84 - C2 -1QQB - PURR_ECOLI -
1 PsiBlast_PDB 82.9530%-102 - C2 -3K4H - ? -
20 PsiBlast_PDB 82.5426% -84 - C2 -1PNR - PURR_ECOLI -
14 PsiBlast_PDB 82.5126% -79 - C2 -2PUB - PURR_ECOLI -
17 PsiBlast_PDB 82.4726% -83 - C2 -2PUE - PURR_ECOLI -
16 PsiBlast_PDB 82.4726% -82 - C2 -2PUD - PURR_ECOLI -
18 PsiBlast_PDB 82.4526% -84 - C2 -2PUF - PURR_ECOLI -
13 PsiBlast_PDB 82.3126% -82 - C2 -2PUA - PURR_ECOLI -
19 PsiBlast_PDB 82.2026% -86 - C2 -2PUG - PURR_ECOLI -
15 PsiBlast_PDB 82.0026% -82 - C2 -2PUC - PURR_ECOLI -
5 PsiBlast_PDB 81.8427% -94 - C2 -2HSG - CCPA_BACME -
52 HHSearch 80.6129% -94 - C2 -3K4H - ? -
35 HHSearch 80.5126% -94 - C2 -2HSG - CCPA_BACME -