@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1513: (2015-12-08 )
MEKTKSFFGHPRGLSTLFFTEMWERFSYYGMRAILLYYMYYSVSQGGLGMDKTVAASIMAVYGSLVYLSSVIGGFVSDRILGSRKTVLYGGILIMLGHIALATPFGQTALFISIALIILGTGLLKPNVSEMVGNLYGENDSRRDAGFSIFVFGINLGAFISPIVVGYLGQEVNFHLGFSLAAIGMFFGLLQYTLDGKKYLTEESLRPNDPLSPEEKSSLYKKVGLILIGIVIVLILLHLMHMLTIEVIIDIFSIIAIAIPIIYFIKILSSKKISSVERSRVWAYIPLFIASILFWSIEEQGSVVLALFADEQTKLYLNFFGHHINFPSSYFQSMNPLFIMLYVPFFAWLWAKWGSKQPSSPKKFAYGLFFAGASFLWMMLPGLLFGVNAKVSPLWLTMSWAIVIVGEMLISPVGLSATSKLAPKAFQAQMMSIWFLSNAAAQAINAQIVKLYTPDTQILYYGVVGGITVVFGFILLFYVPRIEKLMSGVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLC_A_18(4IKW)
?
[Raw transfer]




78N_A_8(4D2C)
?
[Raw transfer]




78M_A_5(4XNI)
?
[Raw transfer]




78N_A_9(4D2B)
?
[Raw transfer]




OLA_A_6(4IKX)
?
[Raw transfer]




OLA_A_12(4IKY)
?
[Raw transfer]




OLA_A_14(4IKW)
?
[Raw transfer]




OLA_A_14(4IKW)
?
[Raw transfer]




6 PsiBlast_PDB 98.2955%-139 - C2 -4IKW 4.2 ?
29 Fugue 97.7055%-138 * C2 *4IKW 4.2 ?
5 PsiBlast_PDB 96.7555%-142 - C2 -4IKV - ? -
8 PsiBlast_PDB 96.7455%-140 - C2 -4IKY 3.9 ?
9 PsiBlast_PDB 96.6455%-137 - C2 -4IKZ - ? -
7 PsiBlast_PDB 96.4055%-139 - C2 -4IKX 2.9 ?
2 PsiBlast_PDB 95.8559%-146 - C2 -4D2B 3.8 ?
3 PsiBlast_PDB 95.2859%-148 - C2 -4D2C 4.6 ?
4 PsiBlast_PDB 94.9659%-143 - C2 -4XNI 4.2 ?
17 PsiBlast_CBE 93.1959%-142 - C2 -4APS - ? -
1 PsiBlast_PDB 92.6759%-143 - C2 -4APS - ? -
10 PsiBlast_PDB 81.0735%-138 - C2 -4W6V - ? -
12 PsiBlast_PDB 71.7529%-141 - C2 -4TPH - ? -
11 PsiBlast_PDB 71.7229%-142 - C2 -4LEP - ? -
14 PsiBlast_PDB 66.6425%-122 - C2 -4UVM - ? -
30 Fugue 65.5321%-123 - C2 -2XUT - ? -
13 PsiBlast_PDB 58.5325%-131 - C2 -2XUT - ? -
33 Fugue 51.9411%-124 - C2 -1PW4 - GLPT_ECOLI -
19 HHSearch 50.3013% -97 - C2 -3WDO - ? -
22 HHSearch 49.0313%-110 - C2 -2CFQ - LACY_ECOLI -