@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1642: (2015-12-09 )
MRINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPIYNEEKVYYLLNKPRGVISSVSDDKGRKTVIDLLPQVKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDGKKTKPARYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFEQVGLLVDKLSRTQFGTLDLTGLRPGEARRLNKKEISQLHNAAINKS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U_A_2(1KSV)
RSUA_ECOLI
[Raw transfer]




BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]




URA_A_2(1KSL)
RSUA_ECOLI
[Raw transfer]




URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]




URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]




URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]




BU1_A_5(1VIO)
RSUA_HAEIN
[Raw transfer]




BU1_A_5(1VIO)
RSUA_HAEIN
[Raw transfer]




26 HHSearch 91.5234% -80 - C2 -1VIO 2.0 RSUA_HAEIN
27 HHSearch 90.5537% -86 - C2 -3DH3 - RLUF_ECOLI -
3 PsiBlast_PDB 89.5534% -81 - C2 -1KSL 2.5 RSUA_ECOLI
2 PsiBlast_PDB 89.3134% -84 - C2 -1KSK 2.6 RSUA_ECOLI
4 PsiBlast_PDB 88.6934% -77 - C2 -1KSV 3.9 RSUA_ECOLI
25 HHSearch 88.5535% -78 - C2 -1KSK 2.6 RSUA_ECOLI
5 PsiBlast_PDB 87.1333% -72 - C2 -1VIO 2.7 RSUA_HAEIN
23 PsiBlast_CBE 86.1435% -65 - C2 -3DH3 - RLUF_ECOLI -
1 PsiBlast_PDB 85.8335% -64 - C2 -3DH3 - RLUF_ECOLI -
21 PsiBlast_CBE 85.8135% -63 - C2 -3DH3 - RLUF_ECOLI -
22 PsiBlast_CBE 85.6335% -65 - C2 -3DH3 - RLUF_ECOLI -
45 Fugue 82.4032% -63 - C2 -1KSK 2.6 RSUA_ECOLI
31 HHSearch 71.3732% -50 - C2 -2OML - RLUE_ECOLI -
30 HHSearch 69.2930% -47 - C2 -2OLW - RLUE_ECOLI -
6 PsiBlast_PDB 69.0533% -73 - C2 -4LAB - RLUB_ECOLI -
24 PsiBlast_CBE 67.6833% -53 - C2 -2OLW - RLUE_ECOLI -
11 PsiBlast_PDB 66.9925% -65 - C2 -2IST - RLUD_ECOLI -
8 PsiBlast_PDB 66.8333% -54 - C2 -2OML - RLUE_ECOLI -
7 PsiBlast_PDB 66.4633% -53 - C2 -2OLW - RLUE_ECOLI -
46 Fugue 65.3522% -46 - C2 -2IST - RLUD_ECOLI -