@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1688: (2015-12-09 )
MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPSDAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MSE_A_2(4Q5T)
?
[Raw transfer]



GLY_B_2(1P99)
?
[Raw transfer]



MET_B_4(3K2D)
?
[Raw transfer]



MET_B_15(4IB2)
?
[Raw transfer]



MET_A_7(4IB2)
?
[Raw transfer]



MET_A_3(3K2D)
?
[Raw transfer]



MET_C_3(1P99)
?
[Raw transfer]



MET_C_3(1P99)
?
[Raw transfer]



MET_A_3(3TQW)
?
[Raw transfer]



MET_C_3(1P99)
?
[Raw transfer]
1 PsiBlast_PDB 96.5056% -57 - C8 -4Q5T 4.1 ?
2 PsiBlast_PDB 87.1141% -59 - C8 -4QHQ - ? -
5 PsiBlast_PDB 84.8938% -56 - C8 -4YAH - METQ_ECOLI -
4 PsiBlast_PDB 84.2940% -55 - C8 -1P99 3.5 ?
42 Fugue 83.7340% -56 - C8 -1P99 3.7 ?
53 HHSearch 83.1140% -57 - C8 -1P99 3.5 ?
56 HHSearch 81.4728% -59 - C8 -1XS5 - TPN32_TREPA -
58 HHSearch 81.1131% -47 * C8 *3GXA - ? -
57 HHSearch 78.3935% -56 - C8 -3TQW 3.7 ?
60 HHSearch 77.7231% -46 - C8 -3IR1 - ? -
52 HHSearch 77.2931% -52 - C8 -3UP9 - ? -
11 PsiBlast_PDB 77.1529% -60 - C8 -1XS5 - TPN32_TREPA -
6 PsiBlast_PDB 75.8341% -55 - C8 -3K2D 3.2 ?
3 PsiBlast_PDB 75.6840% -52 - C8 -4K3F - ? -
21 PsiBlast_CBE 75.1741% -54 - C8 -3K2D 3.0 ?
14 PsiBlast_PDB 73.8536% -57 - C8 -4GOT - METQ_BACSU -
8 PsiBlast_PDB 71.7135% -37 - C8 -4IB2 4.0 ?
10 PsiBlast_PDB 71.6135% -40 - C8 -3IR1 - ? -
23 PsiBlast_CBE 71.3835% -39 - C8 -3GXA - ? -
7 PsiBlast_PDB 71.3534% -40 - C8 -3TQW - ? -
22 PsiBlast_CBE 71.0235% -38 - C8 -4IB2 4.0 ?