@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1729: (2015-12-10 )
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGKVNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A3P_D_4(1FTH)
ACPS_STRPN
[Raw transfer]



A3P_C_24(3HYK)
ACPS_BACAN
[Raw transfer]



A3P_C_24(3HYK)
ACPS_BACAN
[Raw transfer]



A3P_E_5(1FTH)
ACPS_STRPN
[Raw transfer]



GOL_D_(1F7T)
ACPS_BACSU
[Raw transfer]
109 HHSearch 93.6050% -76 - C6 -3QMN - ACPS_VIBCH -
5 PsiBlast_PDB 92.9645%-103 - C6 -4DXE - ACPS_STAAC -
107 HHSearch 92.6152% -93 - C6 -1FTH 3.1 ACPS_STRPN
32 PsiBlast_CBE 92.4046%-101 - C6 -1F7T 3.1 ACPS_BACSU
57 PsiBlast_CBE 92.3644% -83 - C6 -3QMN - ACPS_VIBCH -
34 PsiBlast_CBE 92.3046%-100 - C6 -1F7T - ACPS_BACSU -
7 PsiBlast_PDB 92.2446%-103 - C6 -1F7L - ACPS_BACSU -
4 PsiBlast_PDB 92.2145%-102 - C6 -5CXD - ? -
2 PsiBlast_PDB 92.0951% -91 - C6 -1FTF - ACPS_STRPN -
3 PsiBlast_PDB 92.0851% -92 - C6 -1FTH - ACPS_STRPN -
31 PsiBlast_CBE 91.9346%-101 - C6 -1F7T - ACPS_BACSU -
106 HHSearch 91.7947% -93 - C6 -1F7L - ACPS_BACSU -
6 PsiBlast_PDB 91.7245%-106 - C6 -4JM7 - ACPS_STAAC -
21 PsiBlast_CBE 91.6751% -89 - C6 -1FTH - ACPS_STRPN -
29 PsiBlast_CBE 91.6645%-101 - C6 -4DXE - ACPS_STAAC -
40 PsiBlast_CBE 91.5344% -85 - C6 -3QMN - ACPS_VIBCH -
24 PsiBlast_CBE 91.5251% -90 - C6 -1FTE - ACPS_STRPN -
23 PsiBlast_CBE 91.3751% -86 - C6 -1FTE - ACPS_STRPN -
33 PsiBlast_CBE 91.2646% -97 - C6 -1F7T - ACPS_BACSU -
8 PsiBlast_PDB 91.0446% -98 - C6 -1F7T - ACPS_BACSU -
22 PsiBlast_CBE 90.8851% -91 - C6 -1FTH 4.6 ACPS_STRPN
110 HHSearch 90.1349% -84 * C6 *3HYK 5.1 ACPS_BACAN
10 PsiBlast_PDB 85.1346% -97 - C6 -3HYK 5.0 ACPS_BACAN