@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1815: (2015-12-11 )
MKLRRSERMVVISNYLINNPYTLTSLNTFASKYGAAKSSISEDIAIIKKAFEQAQIGDIKTVTGASGGVIFTPTIAEAEAKEIVEELRQRLSENDRILPGGYIYLSDLLSTPKMLQSIGRIVANAYRGQKIDAVMTVATKGVPLANAVANVLDVPFVIVRRDLKITEGSTVSVNYASGSSGRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTVSGMISLLSEFDSTLVGVAVFAENAQEQREKMAYKSLLRVSEIDVKNNRVSVEAGNIFD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PCP_H_8(1P4A)
PURR_BACSU
[Raw transfer]




EPE_D_14(1O57)
PURR_BACSU
[Raw transfer]




PCP_F_6(1P4A)
PURR_BACSU
[Raw transfer]




PCP_H_8(1P4A)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




EPE_D_14(1O57)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




PCP_F_6(1P4A)
PURR_BACSU
[Raw transfer]




24 PsiBlast_CBE 97.7451%-131 - C2 -1O57 1.7 PURR_BACSU
25 PsiBlast_CBE 97.1751%-132 - C2 -1O57 Error PURR_BACSU
21 PsiBlast_CBE 96.7351%-128 - C2 -1P4A 4.3 PURR_BACSU
1 PsiBlast_PDB 96.5951%-133 - C2 -1O57 - PURR_BACSU -
26 PsiBlast_CBE 96.4451%-130 - C2 -1O57 Error PURR_BACSU
2 PsiBlast_PDB 96.2951%-133 - C2 -1P4A Error PURR_BACSU
22 PsiBlast_CBE 96.1651%-130 - C2 -1P4A Error PURR_BACSU
48 Fugue 95.1450%-131 - C2 -1O57 1.8 PURR_BACSU
23 PsiBlast_CBE 94.7951%-127 - C2 -1P4A 4.9 PURR_BACSU
27 HHSearch 94.2651%-128 - C2 -1O57 1.8 PURR_BACSU
49 Fugue 61.7920%-143 - C2 -1G2Q - APT1_YEAST -
29 HHSearch 60.1521%-142 - C2 -1G2Q - APT1_YEAST -
33 HHSearch 58.1524%-132 - C2 -2DY0 - APT_ECOLI -
5 PsiBlast_PDB 57.9923%-131 - C2 -2FXV - XPT_BACSU -
28 HHSearch 57.5122%-114 - C2 -1Y0B - XPT_BACSU -
31 HHSearch 56.5025%-131 * C2 *1ZN8 - APT_HUMAN -
6 PsiBlast_PDB 56.4023%-120 - C2 -1Y0B - XPT_BACSU -
37 HHSearch 55.3824%-127 - C2 -1QB7 - ? -
12 PsiBlast_PDB 55.0526%-141 - C2 -4MB6 - APT_YERPS -
41 HHSearch 54.3824%-141 - C2 -3M3H - PYRE_BACAN -