@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1997: (2015-12-12 )
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKVGLMGVMADTVIANGGYTTGVIPTFLRDREIAHENLSELIIVNNMPERKAKMMLLGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TAR_A_7(5AJT)
?
[Raw transfer]




SRT_D_13(5AJT)
?
[Raw transfer]




RP5_A_2(5AJU)
?
[Raw transfer]




TAR_B_9(5AJT)
?
[Raw transfer]




TAR_C_11(5AJT)
?
[Raw transfer]




EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]




UNL_B_4(3QUA)
?
[Raw transfer]




UNL_A_3(3QUA)
?
[Raw transfer]




45 HHSearch 96.3443%-124 - C3 -1T35 - YVDD_BACSU -
1 PsiBlast_PDB 94.6241%-124 - C3 -1T35 - YVDD_BACSU -
46 HHSearch 94.0040%-118 - C3 -2A33 - LOG3_ARATH -
43 HHSearch 92.7037%-123 * C3 *1YDH 3.2 LOG8_ARATH
7 PsiBlast_PDB 90.1432%-126 - C3 -5AJU 2.7 ?
29 PsiBlast_CBE 90.1232%-125 - C3 -5AJT 3.6 ?
31 PsiBlast_CBE 89.9332%-126 - C3 -5AJT 3.2 ?
6 PsiBlast_PDB 89.8932%-126 - C3 -5AJT 3.9 ?
30 PsiBlast_CBE 89.5432%-124 - C3 -5AJT 2.4 ?
4 PsiBlast_PDB 85.1540%-123 - C3 -2Q4D - LOG8_ARATH -
47 HHSearch 84.6733%-108 - C3 -3QUA 2.8 ?
3 PsiBlast_PDB 84.2940%-122 - C3 -1YDH - LOG8_ARATH -
21 PsiBlast_CBE 83.5436%-115 - C3 -3QUA 2.8 ?
2 PsiBlast_PDB 83.3436%-111 - C3 -3QUA - ? -
44 HHSearch 82.5930%-117 - C3 -3SBX - LOGH_MYCMM -
24 PsiBlast_CBE 81.8132%-118 - C3 -3SBX - LOGH_MYCMM -
28 PsiBlast_CBE 81.5832%-116 - C3 -3SBX - LOGH_MYCMM -
22 PsiBlast_CBE 81.1532%-113 - C3 -3SBX - LOGH_MYCMM -
25 PsiBlast_CBE 80.4932%-116 - C3 -3SBX - LOGH_MYCMM -
5 PsiBlast_PDB 80.4932%-116 - C3 -3SBX - LOGH_MYCMM -