@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2049: (2015-12-12 )
MKRCSWVNLDNPLYVAYHDKEWGRAVHDDHVLFELLCLETYQSGLSWETVLNKRQEFRQVFHHYNIEKVAAMSDADLEIILQNPRVIRHRLKLFSTRQNARSIILIQKEFGSFDRYIWSFVDNKVQVNSVNNYNDVPASTTLSERLSKDLKKRGFKFVGPTCLYSFIQAAGMVNDHENICDFK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADK_D_15(4AIA)
?
[Raw transfer]



ADK_B_10(4AIA)
?
[Raw transfer]



ADK_A_6(2OFI)
?
[Raw transfer]



ADK_C_12(4AIA)
?
[Raw transfer]



ADK_E_17(4AIA)
?
[Raw transfer]



ADK_A_7(4AIA)
?
[Raw transfer]



PGE_B_6(2OFK)
?
[Raw transfer]



PGE_A_5(2OFK)
?
[Raw transfer]



PGE_A_5(2OFK)
?
[Raw transfer]



ADK_B_10(4AI5)
?
[Raw transfer]



ADK_E_18(4AI5)
?
[Raw transfer]



ADK_C_13(4AI5)
?
[Raw transfer]



ADK_A_7(4AI5)
?
[Raw transfer]



ADK_D_16(4AI5)
?
[Raw transfer]



NACID_B_2(2OFI)
?
[Raw transfer]
-
NACID_C_1(2OFI)
?
[Raw transfer]
-
17 HHSearch 92.7048%-102 - C2 -2OFK 2.5 ?
8 PsiBlast_CBE 91.9748%-108 - C2 -2OFK 2.4 ?
3 PsiBlast_PDB 91.6248%-108 - C2 -2OFI 4.8 ?
1 PsiBlast_PDB 91.6248%-105 - C2 -2OFK 2.5 ?
12 PsiBlast_CBE 85.9136%-104 - C2 -4AIA 4.2 ?
10 PsiBlast_CBE 85.2436% -99 - C2 -4AIA 3.7 ?
38 Fugue 85.0247%-100 - C2 -1LMZ - 3MG1_ECOLI -
2 PsiBlast_PDB 85.0048%-102 - C2 -1LMZ - 3MG1_ECOLI -
16 PsiBlast_CBE 84.9535%-106 - C2 -4AI5 3.6 ?
11 PsiBlast_CBE 84.7736%-100 - C2 -4AIA 3.2 ?
18 HHSearch 84.6936% -95 - C2 -2JG6 - ? -
4 PsiBlast_PDB 84.3236% -95 - C2 -2JG6 - ? -
9 PsiBlast_CBE 84.1336% -97 - C2 -4AIA 3.5 ?
15 PsiBlast_CBE 84.0935%-102 - C2 -4AI5 3.7 ?
6 PsiBlast_PDB 83.7935% -99 - C2 -4AI4 - ? -
5 PsiBlast_PDB 83.6836% -98 - C2 -4AIA 3.6 ?
7 PsiBlast_PDB 83.5935% -97 - C2 -4AI5 3.8 ?
14 PsiBlast_CBE 83.2935%-101 - C2 -4AI5 3.7 ?
13 PsiBlast_CBE 82.9735%-101 - C2 -4AI5 3.8 ?
23 HHSearch 47.1517% -80 - C2 -3FHF - OGG1_METJA -