@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu04100: (2016-06-07 )
MDITFNTGLMGSGKSKKLIDDYLIDPKEKVALSVSLTEDTFSRGKIESRDGRSLRSINLNRDQFKQNISLLEIIIFMTNTQTIYIDESQFLPKETVEKFVSLSESYHVPIHFYGLDLTFTGELFDSSSHLLTILPSENINRISRGCEASKCSKIAQYNARIVDGKVSRSGETFVEEKSYYLALCSDHYYNDEKII

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(5FTB)
?
[Raw transfer]




13 HHSearch 85.6027% -78 - C3 -2B8T - KITH_UREPA -
16 HHSearch 81.5624% -78 - C3 -1XX6 - KITH_CLOAB -
4 PsiBlast_PDB 78.0823%-114 - C3 -2QQ0 - KITH_THEMA -
19 HHSearch 76.9322% -98 - C3 -2J9R - KITH_BACAN -
35 Fugue 76.6221%-112 - C3 -1W4R - KITH_HUMAN -
5 PsiBlast_PDB 76.5223%-114 - C3 -2QQE - KITH_THEMA -
2 PsiBlast_PDB 76.4223%-116 - C3 -2ORW - KITH_THEMA -
20 HHSearch 76.0622%-102 - C3 -1W4R - KITH_HUMAN -
3 PsiBlast_PDB 72.6823%-126 - C3 -2QPO - KITH_THEMA -
15 HHSearch 71.1826%-110 - C3 -2ORW - KITH_THEMA -
18 HHSearch 70.6119% -96 - C3 -4UXH - ? -
17 HHSearch 70.5422%-106 - C3 -2ORV - KITH_HUMAN -
1 PsiBlast_PDB 69.2327% -65 - C3 -1XX6 - KITH_CLOAB -
6 PsiBlast_PDB 61.5527%-102 - C3 -2J87 - KITH_VACCA -
38 Fugue 55.8716% -70 * C4 *3VRH - ? -
39 Fugue 51.4514% -95 - C3 -4KFU - ? -
28 HHSearch 49.2411%-100 * C3 *2DR3 - Y284_PYRHO -
30 HHSearch 46.689%-103 - C3 -4A1F - ? -
44 Fugue 45.7024% -75 - C- -4IL7 - ? -
23 HHSearch 45.5222%-231 - C3 -5HD9 - ? -