@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu05270: (2016-06-08 )
MNSLCRSKQAPFEYTLSLIGGKWKMRILYELGCEKTMRYGELKRAMPFITHKMLSAQLKELQTDGLIHRSEVSHTPLKVEYSLSDRGRSLYPLIDEMCKWGMAQGGPHM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_12(4A5M)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




BME_C_7(4A5N)
YYBR_BACSU
[Raw transfer]




BME_B_6(4A5N)
YYBR_BACSU
[Raw transfer]




BME_D_8(4A5N)
YYBR_BACSU
[Raw transfer]




23 HHSearch 94.6541%-173 - C3 -4A5N 2.0 YYBR_BACSU
14 PsiBlast_CBE 93.0144%-184 - C3 -4A5N 2.8 YYBR_BACSU
1 PsiBlast_PDB 92.8444%-182 - C3 -4A5N 2.0 YYBR_BACSU
13 PsiBlast_CBE 92.2744%-182 - C3 -4A5N 1.8 YYBR_BACSU
15 PsiBlast_CBE 90.4244%-183 - C3 -4A5N 1.9 YYBR_BACSU
18 PsiBlast_CBE 90.2345%-176 - C3 -4A5M 3.0 YYBR_BACSU
2 PsiBlast_PDB 90.1145%-173 - C3 -4A5M 2.2 YYBR_BACSU
19 PsiBlast_CBE 88.5445%-180 - C3 -4A5M - YYBR_BACSU -
16 PsiBlast_CBE 88.0445%-150 - C3 -4A5M - YYBR_BACSU -
17 PsiBlast_CBE 87.5045%-171 - C3 -4A5M - YYBR_BACSU -
22 HHSearch 87.3037%-185 - C- -2FSW - ? -
5 PsiBlast_PDB 86.6037%-191 - C- -2FSW - ? -
3 PsiBlast_PDB 85.8540%-142 - C3 -1Z7U - ? -
24 HHSearch 79.3748%-134 - C3 -2HZT - YTCD_BACSU -
27 HHSearch 79.2340%-146 * C3 *1Z7U - ? -
21 HHSearch 76.5424%-159 - C3 -4HQE - ? -
4 PsiBlast_PDB 75.7850%-123 - C3 -2HZT - YTCD_BACSU -
20 HHSearch 72.5123%-150 - C3 -4GCV - ? -
25 HHSearch 69.7028%-154 - C3 -2F2E - ? -
8 PsiBlast_PDB 67.9624%-144 - C3 -4GCV - ? -