@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu05460: (2016-06-08 )
MKEFFSIGEVSKLFNVKISALRYYDEIGLLKPEYKDEQTNYRYYSTQQFERLDTIKYLRALGLPINKLLDFYNSQNTNTLLHLLKSQQVEIDRKKKELERIERKISRRITHIEDAVNMPLHQISKIKLPAMRVAYLQHEYVLGHDIEHSLAELRTHLNVNEDIFIGKIGLSISAANVKAKQFDKYSSIFMILEDENEKTSSEIIFPSREYLQIRFKGSHPEAEPYYKKLLAYMKEHHYEVAGDSIEITLIDYGITNNLDNYVTEILLPIK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(3Q2Y)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3Q5R)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3Q1M)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3Q5S)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3D70)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3Q5P)
BMRR_BACSU
[Raw transfer]
-
CHAIN_M_1(3D71)
BMRR_BACSU
[Raw transfer]
-
NACID_M_1(1EXJ)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_1(3D6Z)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_1(3D6Y)
BMRR_BACSU
[Raw transfer]
-
CHAIN_B_2(3Q3D)
BMRR_BACSU
[Raw transfer]
-
NACID_M_1(1EXI)
BMRR_BACSU
[Raw transfer]
-
NACID_M_1(1EXJ)
BMRR_BACSU
[Raw transfer]
-
46 HHSearch 94.3425% 0 - C- -1R8E - BMRR_BACSU -
36 Fugue 87.0125%-127 - C1 -1EXJ - BMRR_BACSU -
16 PsiBlast_PDB 65.8628%-184 - C1 -3GPV - ? -
37 Fugue 65.4238%-155 - C1 -1EXJ 4.3 BMRR_BACSU
9 PsiBlast_PDB 64.1956%-169 - C1 -3Q5S 6.5 BMRR_BACSU
6 PsiBlast_PDB 64.0456%-160 - C1 -3Q1M 5.9 BMRR_BACSU
38 Fugue 64.0025%-176 - C1 -1JBG - MTA_BACSU -
11 PsiBlast_PDB 63.3356%-172 - C1 -3Q5P 5.9 BMRR_BACSU
1 PsiBlast_PDB 63.3356%-164 - C1 -3IAO - BMRR_BACSU -
3 PsiBlast_PDB 63.1256%-179 - C1 -1EXJ 4.3 BMRR_BACSU
12 PsiBlast_PDB 63.0556%-159 - C1 -3D6Y 5.9 BMRR_BACSU
7 PsiBlast_PDB 63.0456%-159 - C1 -3Q2Y 5.3 BMRR_BACSU
54 HHSearch 62.4625%-145 - C1 -1R8D - MTA_BACSU -
8 PsiBlast_PDB 62.1156%-161 - C1 -3Q3D 4.9 BMRR_BACSU
14 PsiBlast_PDB 61.8656%-157 - C1 -3D71 5.8 BMRR_BACSU
13 PsiBlast_PDB 61.8056%-153 - C1 -3D6Z 5.6 BMRR_BACSU
56 HHSearch 61.6924%-159 - C1 -2VZ4 - TIPA_STRLI -
10 PsiBlast_PDB 61.5256%-152 - C1 -3Q5R 5.4 BMRR_BACSU
15 PsiBlast_PDB 61.3626%-170 - C1 -2VZ4 - TIPA_STRLI -
52 HHSearch 61.3526%-160 - C1 -3QAO - ? -
5 PsiBlast_PDB 61.0156%-155 - C1 -3D70 5.6 BMRR_BACSU
2 PsiBlast_PDB 60.9556%-183 - C1 -1EXI 3.9 BMRR_BACSU