@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu07390: (2016-06-11 )
MEWMKIDQVAKRSGLTKRTIRFYEEIGLIPAPKRTDGGVRLYSEDDMEELEKVISTKEVLGFSLQELQHFMETSRQLELNKEGYLLSLDPKERKEKLEEIQETLNHQLDLIDEKIRTFQSFKERLQGMKGKAERAIQSIE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_6(3QAO)
?
[Raw transfer]



NACID_D_3(4R4E)
GLNR_BACSU
[Raw transfer]
-
NACID_G_2(4R24)
?
[Raw transfer]
-
65 Fugue 83.6522%-126 - C1 -1EXJ - BMRR_BACSU -
12 PsiBlast_PDB 79.5130% -95 - C1 -3GP4 - ? -
40 HHSearch 79.4227%-104 - C1 -3GP4 - ? -
9 PsiBlast_PDB 79.3730%-119 - C1 -1R8D - MTA_BACSU -
62 Fugue 79.1733%-141 - C1 -1JBG - MTA_BACSU -
46 HHSearch 78.7127%-140 - C1 -2VZ4 - TIPA_STRLI -
10 PsiBlast_PDB 78.1338%-176 - C1 -3HH0 - ? -
8 PsiBlast_PDB 77.9230%-138 - C1 -1JBG - MTA_BACSU -
13 PsiBlast_PDB 77.8029% -92 - C1 -3QAO - ? -
45 HHSearch 77.4427%-151 - C1 -3HH0 - ? -
48 HHSearch 76.9827%-122 * C1 *1R8D - MTA_BACSU -
20 PsiBlast_PDB 74.2428%-105 - C1 -2ZHG - SOXR_ECOLI -
42 HHSearch 74.1129% 0 - C- -1Q06 - CUER_ECOLI -
14 PsiBlast_PDB 73.9933%-175 - C1 -3GPV - ? -
44 HHSearch 72.3823%-111 - C1 -2ZHG - SOXR_ECOLI -
66 Fugue 72.0532%-145 - C1 -4R4E - GLNR_BACSU -
49 HHSearch 71.7933%-152 - C1 -3QAO 2.2 ?
41 HHSearch 71.3030% -49 - C1 -4UA1 - ? -
5 PsiBlast_PDB 71.1344%-127 - C1 -1Q07 - CUER_ECOLI -
4 PsiBlast_PDB 70.5844%-126 - C1 -1Q06 - CUER_ECOLI -
54 HHSearch 69.4631%-151 - C1 -4R4E 2.6 GLNR_BACSU
53 HHSearch 67.3232%-108 - C1 -4R24 4.7 ?