@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu10340: (2016-06-16 )
MTAVCLVRHGETDWNLQQKCQGKTDIPLNATGERQARETGEYVKDFSWDIIVTSPLKRAKRTAEIINEYLHLPIVEMDDFKERDYGDAEGMPLEERTKRYPDNIYPNMETLEELTDRLMGGLAKVNQAYPNKKVLIVAHGAAIHALLTEISGGDPELQSTRLVNACLSNIEFAEEKWRIKDYNINSHLSGFIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]
33 HHSearch 90.3730% 0 - C- -3GP3 - GPMA_BURP1 -
2 PsiBlast_PDB 86.3230% 0 - C- -4IJ6 - PSPA_HYDTT -
12 PsiBlast_PDB 84.8926% 0 - C- -3GP3 - GPMA_BURP1 -
28 HHSearch 72.9732% -97 - C1 -4IJ5 - PSPA_HYDTT -
1 PsiBlast_PDB 71.4230% -95 - C1 -4IJ5 - PSPA_HYDTT -
40 HHSearch 67.6826%-104 - C1 -3HJG - ? -
49 HHSearch 66.7231% -87 - C- -3D8H - ? -
35 HHSearch 65.2328% -70 - C1 -3DCY - TIGAR_HUMAN -
7 PsiBlast_PDB 65.0528% -97 - C1 -3HJG - ? -
10 PsiBlast_PDB 64.7226% -79 - C1 -3EZN - GPMA_BURP1 -
37 HHSearch 64.4927% -72 - C1 -4EMB 3.6 GPMA_BORBU
31 HHSearch 64.3630%-112 - C1 -3E9C - TIGRB_DANRE -
9 PsiBlast_PDB 64.3526% -73 - C1 -3LNT - GPMA_BURP1 -
30 HHSearch 64.1526% -70 - C1 -1H2E - ? -
14 PsiBlast_PDB 63.3526% -73 - C1 -3GW8 - GPMA_BURP1 -
13 PsiBlast_PDB 63.2826% -75 - C1 -3GP5 - GPMA_BURP1 -
11 PsiBlast_PDB 62.9726% -73 - C1 -3FDZ - GPMA_BURP1 -
36 HHSearch 62.6329% -56 * C1 *1QHF - PMG1_YEAST -
48 HHSearch 62.2626% -77 - C1 -1RII 2.6 GPMA_MYCTU
15 PsiBlast_PDB 62.0228% -63 - C- -3D8H - ? -