@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu12890: (2016-06-20 )
MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDRSIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILEMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFLYMFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQKSYGIENKRLYRDQHMS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_C_5(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_B_9(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_B_7(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_C_9(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_A_5(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_D_11(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_A_5(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_A_7(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_D_11(5EKP)
Y501_SYNY3
[Raw transfer]




1 PsiBlast_PDB 87.4247%-131 - C4 -5EKP 3.8 Y501_SYNY3
45 Fugue 87.2248%-130 - C4 -5EKE - Y501_SYNY3 -
21 PsiBlast_CBE 85.6847%-130 - C4 -5EKE 3.3 Y501_SYNY3
22 PsiBlast_CBE 84.9447%-128 - C4 -5EKE 3.8 Y501_SYNY3
23 HHSearch 84.3547%-130 - C4 -5EKE 4.0 Y501_SYNY3
18 PsiBlast_CBE 84.3347%-129 - C4 -5EKP 2.7 Y501_SYNY3
19 PsiBlast_CBE 84.1847%-130 - C4 -5EKP 4.1 Y501_SYNY3
17 PsiBlast_CBE 83.9947%-134 - C4 -5EKP 3.7 Y501_SYNY3
20 PsiBlast_CBE 83.3847%-138 - C4 -5EKE 3.0 Y501_SYNY3
2 PsiBlast_PDB 82.7547%-133 - C4 -5EKE 4.0 Y501_SYNY3
32 HHSearch 57.6316%-124 - C4 -3CKJ - GPGS_MYCPA -
24 HHSearch 53.9918%-141 - C4 -3BCV - ? -
27 HHSearch 51.7816%-111 - C4 -2BO4 - MGS_RHOMR -
34 HHSearch 51.2419%-118 - C4 -2Z86 - CHS_ECOLX -
54 Fugue 51.1313%-136 - C4 -1FO8 - MGAT1_RABIT -
25 HHSearch 50.8614%-118 - C4 -3F1Y - ? -
3 PsiBlast_PDB 50.3730%-150 - C4 -3BCV - ? -
37 HHSearch 49.2114%-130 - C4 -2ZU9 - MPGS_PYRHO -
30 HHSearch 49.1818% -87 - C4 -5AJO - GALT2_HUMAN -
46 Fugue 48.9013%-107 - C4 -3CKJ - GPGS_MYCPA -