@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13390: (2016-06-20 )
MKQSQPVLTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWALIAMESIRNKKVTGLKLACNVGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFMLKYHEGCEIVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIKLIYNHADFRLMNKRSLEELERYPEANLFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRFFTLLGFVLFFLSAVAGIGAFIQKLLGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTIFSEVKRRPKYAIDIDLYNEQLSPLQRQEKERLEKKYS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_C_5(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_A_5(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_A_5(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_D_11(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_A_5(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_C_9(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_B_9(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_A_7(5EKP)
Y501_SYNY3
[Raw transfer]




UDP_B_7(5EKE)
Y501_SYNY3
[Raw transfer]




UDP_D_11(5EKP)
Y501_SYNY3
[Raw transfer]




27 HHSearch 89.2937%-122 - C2 -5EKE 3.9 Y501_SYNY3
25 PsiBlast_CBE 89.2638%-135 - C2 -5EKE 2.9 Y501_SYNY3
49 Fugue 88.9236%-120 - C2 -5EKE 3.6 Y501_SYNY3
1 PsiBlast_PDB 88.0038%-137 - C2 -5EKP 3.8 Y501_SYNY3
23 PsiBlast_CBE 87.8838%-129 - C2 -5EKP 4.1 Y501_SYNY3
26 PsiBlast_CBE 87.0738%-128 - C2 -5EKE 2.7 Y501_SYNY3
22 PsiBlast_CBE 87.0238%-130 - C2 -5EKP 2.9 Y501_SYNY3
2 PsiBlast_PDB 86.9338%-130 - C2 -5EKE 3.9 Y501_SYNY3
24 PsiBlast_CBE 86.2838%-142 - C2 -5EKE 3.0 Y501_SYNY3
21 PsiBlast_CBE 85.8138%-137 - C2 -5EKP 3.6 Y501_SYNY3
45 HHSearch 56.0816%-157 - C2 -1FO8 - MGAT1_RABIT -
35 HHSearch 55.3617%-113 - C2 -3CKJ - GPGS_MYCPA -
28 HHSearch 51.2217%-134 - C2 -3BCV - ? -
37 HHSearch 49.2616%-123 - C2 -2ZU9 - MPGS_PYRHO -
47 HHSearch 48.2514%-142 - C2 -2FY7 - B4GT1_HUMAN -
29 HHSearch 47.1017%-119 - C2 -3F1Y - ? -
41 HHSearch 45.5214%-120 - C2 -2WVL - ? -
30 HHSearch 43.3714% -90 - C2 -2BO4 - MGS_RHOMR -
40 HHSearch 42.9917% -99 - C2 -4P02 - ? -
48 HHSearch 42.6711%-128 - C2 -3LW6 - ? -