@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13730: (2016-06-21 )
MLSQIYPQAQHPYSFELNKDMHISAAHFIPRESAGACSRVHGHTYTVNITVAGDELDDSGFLVNFSVLKKLVHGNYDHTLLNDHEDFSQDDRYSLPTTEVVAKTIYDNVQAYLDTLENKPTCVQVFVRETPTSYCVYRPKKGGLNG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BIO_D_13(3QNA)
QUED_ECOLI
[Raw transfer]




BIO_E_15(3QNA)
QUED_ECOLI
[Raw transfer]




BIO_C_11(3QNA)
QUED_ECOLI
[Raw transfer]




BIO_B_9(3QNA)
QUED_ECOLI
[Raw transfer]




BIO_A_7(3QNA)
QUED_ECOLI
[Raw transfer]




BIO_F_17(3QNA)
QUED_ECOLI
[Raw transfer]




ZSP_A_8(4NTK)
QUED_ECOLI
[Raw transfer]




BIO_A_5(1B66)
PTPS_RAT
[Raw transfer]




33 PsiBlast_CBE 85.1933%-167 - C7 -4NTK - QUED_ECOLI -
36 PsiBlast_CBE 84.9533%-169 - C7 -4NTK - QUED_ECOLI -
26 PsiBlast_CBE 84.9133%-161 - C7 -3QN0 - QUED_ECOLI -
5 PsiBlast_PDB 84.7734%-170 - C7 -4NTN - QUED_ECOLI -
30 PsiBlast_CBE 84.6032%-165 - C7 -3QNA 3.0 QUED_ECOLI
29 PsiBlast_CBE 84.5532%-174 - C7 -3QNA 4.6 QUED_ECOLI
34 PsiBlast_CBE 84.2433%-165 - C7 -4NTK - QUED_ECOLI -
35 PsiBlast_CBE 83.6833%-162 - C7 -4NTK - QUED_ECOLI -
24 PsiBlast_CBE 83.4333%-163 - C7 -3QN0 - QUED_ECOLI -
23 PsiBlast_CBE 83.4333%-170 - C7 -3QN0 - QUED_ECOLI -
21 PsiBlast_CBE 83.2033%-177 - C7 -3QN9 - QUED_ECOLI -
22 PsiBlast_CBE 83.1633%-155 - C7 -3QN0 - QUED_ECOLI -
27 PsiBlast_CBE 82.8132%-166 - C7 -3QNA 4.0 QUED_ECOLI
28 PsiBlast_CBE 82.7232%-164 - C7 -3QNA 3.2 QUED_ECOLI
6 PsiBlast_PDB 82.7133%-165 - C7 -4NTK - QUED_ECOLI -
1 PsiBlast_PDB 82.5233%-167 - C7 -3QN0 - QUED_ECOLI -
32 PsiBlast_CBE 82.3133%-157 - C7 -4NTK - QUED_ECOLI -
25 PsiBlast_CBE 82.3133%-158 - C7 -3QN0 - QUED_ECOLI -
3 PsiBlast_PDB 81.3332%-170 - C7 -3QNA 4.8 QUED_ECOLI
2 PsiBlast_PDB 80.7033%-165 - C7 -3QN9 - QUED_ECOLI -
31 PsiBlast_CBE 80.6132%-158 - C7 -3QNA 4.0 QUED_ECOLI
52 HHSearch 80.0834%-160 - C7 -4NTK 3.1 QUED_ECOLI
56 HHSearch 79.9030%-164 - C7 -1B66 4.4 PTPS_RAT