@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu13760: (2016-06-21 )
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




BME_B_6(4A5N)
YYBR_BACSU
[Raw transfer]




BME_D_8(4A5N)
YYBR_BACSU
[Raw transfer]




BME_C_7(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_14(4A5M)
YYBR_BACSU
[Raw transfer]




19 PsiBlast_CBE 88.3455%-157 - C2 -4A5M - YYBR_BACSU -
21 PsiBlast_CBE 87.9456%-165 - C2 -4A5N 2.8 YYBR_BACSU
17 PsiBlast_CBE 87.7255%-150 - C2 -4A5M - YYBR_BACSU -
1 PsiBlast_PDB 87.6655%-150 - C2 -4A5M Error YYBR_BACSU
18 PsiBlast_CBE 87.3455%-153 - C2 -4A5M 3.0 YYBR_BACSU
3 PsiBlast_PDB 87.0456%-164 - C2 -4A5N - YYBR_BACSU -
22 PsiBlast_CBE 86.7856%-164 - C2 -4A5N 1.9 YYBR_BACSU
37 HHSearch 86.3147%-157 - C2 -4A5N 2.7 YYBR_BACSU
20 PsiBlast_CBE 85.9656%-160 - C2 -4A5N 2.7 YYBR_BACSU
16 PsiBlast_CBE 85.5355%-135 - C2 -4A5M - YYBR_BACSU -
39 HHSearch 82.2758%-125 - C2 -2HZT - YTCD_BACSU -
2 PsiBlast_PDB 81.8160%-127 - C2 -2HZT - YTCD_BACSU -
5 PsiBlast_PDB 77.6740%-184 - C- -2FSW - ? -
36 HHSearch 77.1939%-180 - C- -2FSW - ? -
40 HHSearch 71.3539%-127 - C2 -1Z7U - ? -
4 PsiBlast_PDB 70.3043%-128 - C2 -1Z7U - ? -
7 PsiBlast_PDB 66.6727%-139 - C2 -4HQM - ? -
38 HHSearch 65.4226%-151 - C2 -2F2E - ? -
26 Fugue 64.1637% -99 - C2 -1Z7U - ? -
9 PsiBlast_PDB 63.8228%-128 - C2 -2F2E - ? -