@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23970: (2016-07-07 )
MNLDFSATIPQIPFILEGLAITLKIVVVSAIIGLILGIVLSLCKISTFRPFIWIADFYTSVFRGTPLVLQLMIVYFGLPQLLGFQIDQFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVMRRAYQAGAATYNYLEPLIIAGLIYYVLVLILTFIGKAVERKLKSND

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ARG_D_9(4YMU)
?
[Raw transfer]



ARG_B_6(4YMT)
?
[Raw transfer]



ARG_D_9(4YMU)
?
[Raw transfer]



HIS_C_6(4YMW)
?
[Raw transfer]



ARG_C_5(4YMT)
?
[Raw transfer]



ARG_D_9(4YMU)
?
[Raw transfer]



ARG_D_9(4YMU)
?
[Raw transfer]



ARG_C_5(4YMT)
?
[Raw transfer]



HIS_D_5(4YMW)
?
[Raw transfer]



HIS_D_5(4YMW)
?
[Raw transfer]
13 PsiBlast_CBE 92.3744%-168 - C5 -4YMW 2.6 ?
15 PsiBlast_CBE 92.1344%-169 - C5 -4YMT 3.4 ?
5 PsiBlast_PDB 90.7944%-163 - C5 -4YMW 3.7 ?
4 PsiBlast_PDB 90.7944%-164 - C5 -4YMV - ? -
1 PsiBlast_PDB 90.6544%-165 - C5 -4YMS - ? -
25 HHSearch 89.2644%-168 - C5 -4YMU 3.2 ?
3 PsiBlast_PDB 88.8244%-168 - C5 -4YMU 3.2 ?
16 Fugue 88.6744%-168 - C5 -4YMU 3.0 ?
14 PsiBlast_CBE 88.6744%-168 - C5 -4YMU 3.0 ?
2 PsiBlast_PDB 86.9044%-165 - C5 -4YMT 4.1 ?
26 HHSearch 69.8422%-117 * C5 *3TUI - METI_ECOLI -
8 PsiBlast_PDB 68.3427%-100 - C5 -3TUZ - METI_ECOLI -
17 Fugue 64.8723%-131 - C5 -3DHW - METI_ECOLI -
7 PsiBlast_PDB 63.9027% -96 - C5 -3TUI - METI_ECOLI -
9 PsiBlast_PDB 61.9027%-107 - C5 -3TUJ - METI_ECOLI -
18 Fugue 61.0613%-151 - C5 -2ONK - WTPB_ARCFU -
29 HHSearch 57.9712%-107 - C5 -3RLF - MALF_ECOLI -
30 HHSearch 56.0416%-108 - C5 -4TQU - ? -
31 HHSearch 55.5519%-121 - C5 -3RLF - MALG_ECOLI -
6 PsiBlast_PDB 55.3027% -99 - C5 -3DHW - METI_ECOLI -