@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu25130: (2016-07-09 )
MLRIGSHVSMSGKHMLLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMQENGIDEIIVHAPYIINIGNTTNPSTFELGVDFLRSEIERTAAIGAKQIVLHPGAHVGAGAEAGIKKIIEGLNEVIDPNQNVQIALETMAGKGSECGRSFEELAQIIEGVTHNEQLSVCFDTCHTHDAGYNIVEDFDGVLNEFDKIIGIDRIKVLHINDSKNVKGARKDRHENIGFGEIGFDALQYVVHHEQLKDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDDTLLEKILQQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BCN_A_5(2X7W)
END4_THEMA
[Raw transfer]



NACID_B_1(1QUM)
END4_ECOLI
[Raw transfer]
-
NACID_M_6(4K1G)
END4_ECOLI
[Raw transfer]
-
NACID_C_2(1QUM)
END4_ECOLI
[Raw transfer]
-
NACID_B_1(2NQ9)
END4_ECOLI
[Raw transfer]
-
TRS_A_8(4HNO)
END4_THEMA
[Raw transfer]
1 PsiBlast_PDB 97.9779% -96 - C2 -3AAL - END4_GEOKA -
23 HHSearch 90.0179% -18 - C2 -3AAL - END4_GEOKA -
2 PsiBlast_PDB 88.4478% -18 - C2 -1XP3 - END4_BACAN -
6 PsiBlast_PDB 73.0433%-112 - C2 -3AAM - ? -
43 Fugue 68.4031% -0 - C2 -1QTW - END4_ECOLI -
24 HHSearch 66.6732% -10 - C2 -1QTW - END4_ECOLI -
27 HHSearch 65.2133% -28 - C2 -3AAM - ? -
8 PsiBlast_PDB 64.7031% -7 - C2 -1QTW - END4_ECOLI -
7 PsiBlast_PDB 64.6431% -3 - C2 -1QUM 4.5 END4_ECOLI
21 PsiBlast_CBE 64.3031% -7 - C2 -2NQJ - END4_ECOLI -
12 PsiBlast_PDB 64.1131% -8 - C2 -2NQ9 3.0 END4_ECOLI
9 PsiBlast_PDB 64.0231% -6 - C2 -2NQH - END4_ECOLI -
10 PsiBlast_PDB 63.7231% -5 - C2 -2NQJ - END4_ECOLI -
11 PsiBlast_PDB 63.6031% -7 - C2 -4K1G - END4_ECOLI -
45 Fugue 63.5829% 15 - C2 -1QTW - END4_ECOLI -
22 PsiBlast_CBE 63.3031% -5 - C2 -4K1G 4.8 END4_ECOLI
25 HHSearch 61.5933% 41 - C2 -4HNO 3.2 END4_THEMA
3 PsiBlast_PDB 60.2034% 32 - C2 -2X7V - END4_THEMA -
4 PsiBlast_PDB 60.1934% 34 - C2 -2X7W 2.2 END4_THEMA
5 PsiBlast_PDB 56.1834% 44 - C2 -4HNO - END4_THEMA -