@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu26850: (2016-07-11 )
MEYTYLGRTGLRVSRLCLGTMNFGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLLGGKALKSNAGTRTAKRADLIEKHRLQLEKFSDLCKELGEKEANVALAWVLANPVLTAPIIGPRTVEQLRDTIKAVEISLDKEILRMLNDIFPGPGGETPEAYAW

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_3(1GVE)
ARK73_RAT
[Raw transfer]



CIT_A_6(1GVE)
ARK73_RAT
[Raw transfer]



FLC_D_8(2BP1)
ARK72_HUMAN
[Raw transfer]



FLC_A_5(2BP1)
ARK72_HUMAN
[Raw transfer]



FLC_B_6(2BP1)
ARK72_HUMAN
[Raw transfer]



FLC_C_7(2BP1)
ARK72_HUMAN
[Raw transfer]
10 PsiBlast_PDB 86.7830% 0 - C- -2A79 - KCAB2_RAT -
4 PsiBlast_PDB 81.7531% 0 - C- -3V0U - PERR_RAUSE -
3 PsiBlast_PDB 80.9031% 0 - C- -3V0T - PERR_RAUSE -
20 PsiBlast_PDB 79.0032%-131 - C8 -1YNP - ? -
45 HHSearch 78.6232% 11 - C8 -1LQA - TAS_ECOLI -
49 HHSearch 77.4532%-103 - C8 -1YNP - ? -
9 PsiBlast_PDB 76.9530% -7 - C8 -1EXB - KCAB2_RAT -
68 Fugue 76.9130% 11 - C8 -1QRQ - KCAB2_RAT -
7 PsiBlast_PDB 76.6130% -5 - C8 -3LUT - KCAB2_RAT -
8 PsiBlast_PDB 76.5730% -6 - C8 -1QRQ - KCAB2_RAT -
1 PsiBlast_PDB 76.5430% 14 - C8 -1LQA - TAS_ECOLI -
15 PsiBlast_PDB 76.4530% -5 - C8 -4JTD - KCAB2_RAT -
11 PsiBlast_PDB 76.3730% -7 - C8 -2R9R - KCAB2_RAT -
50 HHSearch 76.3629% -10 - C8 -3LUT - KCAB2_RAT -
48 HHSearch 76.3229% -10 * C8 *3EAU - KCAB2_RAT -
5 PsiBlast_PDB 76.2830% -5 - C8 -3EB3 - KCAB2_RAT -
14 PsiBlast_PDB 76.1330% -6 - C8 -4JTC - KCAB2_RAT -
12 PsiBlast_PDB 75.9330% -7 - C8 -3LNM - KCAB2_RAT -
6 PsiBlast_PDB 75.6530% -6 - C8 -3EAU - KCAB2_RAT -
13 PsiBlast_PDB 75.3830% -6 - C8 -4JTA - KCAB2_RAT -
39 PsiBlast_CBE 57.0831% -93 - C8 -1GVE 7.3 ARK73_RAT
26 PsiBlast_CBE 56.9532% -85 - C8 -2BP1 3.3 ARK72_HUMAN
24 PsiBlast_CBE 56.9332% -89 - C8 -2BP1 3.3 ARK72_HUMAN
25 PsiBlast_CBE 56.9032% -89 - C8 -2BP1 3.0 ARK72_HUMAN
27 PsiBlast_CBE 55.6632% -85 - C8 -2BP1 3.2 ARK72_HUMAN