@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27560: (2016-07-13 )
MGYNIPRGTQDILPGESDRWQFVEQIMRDTCRTYQYKEIRTPIFEHTELFARGVGESTDIVQKEMYTFEDRKGRSLTLRPEGTAAAVRAFNENKLFANPVQPTKLYYVGPMFRYERPQTGRYRQFYQFGIEAIGSKDPAIDAEVMALAMSIYEKAGLENVKLVINSLGDQDSRKSYREALVKHFEPRIEEFCSDCQSRLHTNPLRILDCKKDRDHELMKSAPSILTYLNEESAAYFEKVKQYLNDLGISYEIDPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIERLLAAIDAEKRELPVDKGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKKMKGQFKTADRLKARFIAILGEDELAQNKINVKDAQTGEQIEVALDEFIHVMKANQKG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_7(5E3I)
SYH_ACIBS
[Raw transfer]



ATP_A_4(5E3I)
SYH_ACIBS
[Raw transfer]



ATP_A_4(5E3I)
SYH_ACIBS
[Raw transfer]



CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]
-
CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]
-
51 HHSearch 90.9061% -63 - C1 -1QE0 - SYH_STAAU -
1 PsiBlast_PDB 90.4261% -61 * C2 *1QE0 - SYH_STAAU -
36 PsiBlast_CBE 81.7643% -23 - C1 -1ADJ - SYH_THET8 -
7 PsiBlast_PDB 81.5943% -21 - C1 -1ADJ - SYH_THET8 -
8 PsiBlast_PDB 81.0143% -15 - C1 -1ADY - SYH_THET8 -
33 PsiBlast_CBE 80.8343% -17 - C1 -1ADY - SYH_THET8 -
34 PsiBlast_CBE 80.2643% -16 - C1 -1ADY - SYH_THET8 -
38 PsiBlast_CBE 80.2343% -19 - C1 -1ADJ - SYH_THET8 -
37 PsiBlast_CBE 80.1943% -20 - C1 -1ADJ - SYH_THET8 -
35 PsiBlast_CBE 79.5943% -17 - C1 -1ADY - SYH_THET8 -
53 HHSearch 79.2842% -18 - C1 -1H4V - SYH_THET2 -
6 PsiBlast_PDB 78.5543% -18 - C1 -4RDX - SYH_THET2 -
9 PsiBlast_PDB 77.3243% -21 - C1 -1H4V - SYH_THET2 -
52 HHSearch 76.7542% -0 - C1 -4E51 - SYH_BURTA -
31 PsiBlast_CBE 75.4545% -19 - C1 -2EL9 - SYH_ECOLI -
28 PsiBlast_CBE 74.3445% -19 - C1 -1HTT - SYH_ECOLI -
50 HHSearch 74.1744% -6 - C1 -1HTT 3.5 SYH_ECOLI
29 PsiBlast_CBE 74.1745% -23 - C1 -1HTT - SYH_ECOLI -
57 HHSearch 73.8041% 14 * C1 *5E3I 7.7 SYH_ACIBS
5 PsiBlast_PDB 73.5345% -22 - C1 -2EL9 - SYH_ECOLI -
4 PsiBlast_PDB 73.5045% -17 - C1 -1HTT 3.5 SYH_ECOLI
39 PsiBlast_CBE 69.0141% 36 - C1 -5E3I 7.3 SYH_ACIBS
10 PsiBlast_PDB 67.9141% 39 - C1 -5E3I 7.7 SYH_ACIBS