@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29030: (2016-07-16 )
MEKKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGILDMLCAWGANHINRVYGDTFSVLEESVLNDKLKQES

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_12(4A5M)
YYBR_BACSU
[Raw transfer]




BME_C_7(4A5N)
YYBR_BACSU
[Raw transfer]




BME_B_6(4A5N)
YYBR_BACSU
[Raw transfer]




BME_D_8(4A5N)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




32 HHSearch 90.0795%-121 - C2 -2HZT - YTCD_BACSU -
1 PsiBlast_PDB 88.7992%-120 - C2 -2HZT - YTCD_BACSU -
29 HHSearch 85.3449%-162 - C2 -4A5N 2.7 YYBR_BACSU
2 PsiBlast_PDB 83.5058%-166 - C2 -4A5N 2.7 YYBR_BACSU
22 PsiBlast_CBE 81.6456%-140 - C2 -4A5M - YYBR_BACSU -
21 PsiBlast_CBE 81.5858%-165 - C2 -4A5N 1.9 YYBR_BACSU
19 PsiBlast_CBE 81.4158%-162 - C2 -4A5N 2.7 YYBR_BACSU
23 PsiBlast_CBE 81.2856%-161 - C2 -4A5M - YYBR_BACSU -
25 PsiBlast_CBE 81.2456%-169 - C2 -4A5M - YYBR_BACSU -
20 PsiBlast_CBE 81.2058%-164 - C2 -4A5N 2.8 YYBR_BACSU
3 PsiBlast_PDB 80.9156%-162 - C2 -4A5M 2.2 YYBR_BACSU
24 PsiBlast_CBE 80.8256%-163 - C2 -4A5M 3.0 YYBR_BACSU
28 HHSearch 72.6632%-181 - C- -2FSW - ? -
5 PsiBlast_PDB 72.6131%-188 - C- -2FSW - ? -
4 PsiBlast_PDB 72.2044%-129 - C2 -1Z7U - ? -
31 HHSearch 71.6039%-123 * C2 *1Z7U - ? -
7 PsiBlast_PDB 69.1027%-155 - C2 -2F2E - ? -
6 PsiBlast_PDB 68.5829%-145 - C2 -4GCV - ? -
30 HHSearch 66.7225%-152 - C2 -2F2E - ? -
26 HHSearch 66.6926%-142 - C2 -4GCV - ? -