@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu31760: (2016-07-22 )
MKKALICIDYTNDFVASDGKLTCGEPGRMIEEAIVNLTKEFITNGDYVVLAVDSHDEGDQYHPETRLFPPHNIKGTEGKDLYGKLLPLYQKHEHEPNVYYMEKTRYSAFAGTDLELKLRERQIGELHLAGVCTDICVLHTAVDAYNKGFRIVVHKQAVASFNQEGHAWALSHFANSIGAQVAE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCA_C_9(3O94)
?
[Raw transfer]



NCA_A_5(3O94)
?
[Raw transfer]



NCA_A_5(3O94)
?
[Raw transfer]



NCA_D_11(3O94)
?
[Raw transfer]



NCA_B_7(3O94)
?
[Raw transfer]



CAD_A_6(3S2S)
?
[Raw transfer]



CAD_B_8(3S2S)
?
[Raw transfer]



CAD_D_12(3S2S)
?
[Raw transfer]



CAD_C_10(3S2S)
?
[Raw transfer]
21 PsiBlast_CBE 91.1458%-128 - C5 -3S2S 2.7 ?
22 PsiBlast_CBE 90.8958%-126 - C5 -3S2S 2.7 ?
1 PsiBlast_PDB 90.6058%-124 - C5 -3S2S 2.7 ?
28 PsiBlast_CBE 86.9851%-122 - C5 -3O94 3.8 ?
53 HHSearch 86.7452%-126 - C5 -3O94 3.7 ?
27 PsiBlast_CBE 86.5951%-123 - C5 -3O94 3.7 ?
2 PsiBlast_PDB 86.4252%-130 - C5 -3O90 - ? -
24 PsiBlast_CBE 86.2352%-130 - C5 -3O90 - ? -
26 PsiBlast_CBE 86.1352%-126 - C5 -3O90 - ? -
3 PsiBlast_PDB 85.5951%-123 - C5 -3O94 3.7 ?
29 PsiBlast_CBE 84.9251%-122 - C5 -3O94 3.8 ?
25 PsiBlast_CBE 83.6952%-137 - C5 -3O90 - ? -
36 PsiBlast_CBE 82.9451%-126 - C5 -3O91 - ? -
37 PsiBlast_CBE 82.4751%-127 - C5 -3O91 - ? -
33 PsiBlast_CBE 82.2951%-128 - C5 -3O92 - ? -
35 PsiBlast_CBE 82.1751%-129 - C5 -3O92 - ? -
4 PsiBlast_PDB 81.7451%-123 - C5 -3O91 - ? -
23 PsiBlast_CBE 81.7358%-131 - C5 -3S2S 2.8 ?
34 PsiBlast_CBE 81.6451%-130 - C5 -3O92 - ? -
38 PsiBlast_CBE 81.0851%-125 - C5 -3O91 - ? -