@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34630: (2016-07-28 )
MATLSDVAKKANVSKMTVSRVINHPETVTDELKKLVHSAMKELNYIPNYAARALVQNRTQVVKLLILEEMDTTEPYYMNLLTGISRELDRNHYALQLVTRNSLNIGQCDGIIATGLRKNDFEGVIKAFEKPLVVFGQNEMGYDFIDVNNEKGTFMATRHVMGLGEREVVFFGIDLDEPFERAREQGYIRAMNKSFKKSNMFRIDNSSKKSECLARELLKSMDNQAAFVCASDRIALGVIRAAQSLGKRIPEDVAVTGNDGVFLDRISSPRLTTVRQPVVEMGEACAKMLLKKMNEDGAAQGSLFFEPELIVRESTL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_B_1(1JH9)
PURR_ECOLI
[Raw transfer]
-
NACID_M_1(1QPZ)
PURR_ECOLI
[Raw transfer]
-
NACID_M_1(1QPZ)
PURR_ECOLI
[Raw transfer]
-
NACID_B_1(2PUA)
PURR_ECOLI
[Raw transfer]
-
NACID_M_1(1QPZ)
PURR_ECOLI
[Raw transfer]
-
NACID_M_1(1QP4)
PURR_ECOLI
[Raw transfer]
-
61 HHSearch 75.9630% -12 - C2 -1QPZ 5.2 PURR_ECOLI
3 PsiBlast_PDB 75.2730% -15 - C2 -1QQA - PURR_ECOLI -
9 PsiBlast_PDB 75.2530% -13 - C2 -1PNR - PURR_ECOLI -
10 PsiBlast_PDB 75.0330% -16 - C2 -1BDI - PURR_ECOLI -
1 PsiBlast_PDB 74.7330% -14 * C2 *1BDH - PURR_ECOLI -
13 PsiBlast_PDB 74.5130% -14 - C2 -1QP4 4.1 PURR_ECOLI
20 PsiBlast_PDB 73.6830% -12 - C2 -1JFT - PURR_ECOLI -
2 PsiBlast_PDB 73.6530% -13 - C2 -1QP7 - PURR_ECOLI -
14 PsiBlast_PDB 73.6430% -12 - C2 -1QPZ 5.2 PURR_ECOLI
16 PsiBlast_PDB 73.6129% -10 - C2 -2PUA 5.3 PURR_ECOLI
4 PsiBlast_PDB 73.5230% -13 - C2 -1QQB - PURR_ECOLI -
12 PsiBlast_PDB 73.4130% -11 - C2 -1QP0 - PURR_ECOLI -
8 PsiBlast_PDB 73.3930% -10 - C2 -1JH9 4.9 PURR_ECOLI
11 PsiBlast_PDB 72.8330% -13 - C2 -1WET - PURR_ECOLI -
15 PsiBlast_PDB 72.7330% -10 - C2 -1ZAY - PURR_ECOLI -
19 PsiBlast_PDB 72.6129% -9 - C2 -2PUD - PURR_ECOLI -
18 PsiBlast_PDB 72.3029% -7 - C2 -2PUC - PURR_ECOLI -
17 PsiBlast_PDB 72.3029% -6 - C2 -2PUB - PURR_ECOLI -
7 PsiBlast_PDB 72.1429% -11 - C2 -2PUG - PURR_ECOLI -
5 PsiBlast_PDB 72.1229% -11 - C2 -2PUE - PURR_ECOLI -
48 Fugue 32.6251% -76 - C2 -1QPZ 4.2 PURR_ECOLI